Gossypium hirsutum (upland cotton): 107907253
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Entry
107907253 CDS
T04793
Name
(RefSeq) serine-threonine kinase receptor-associated protein
KO
K13137
serine-threonine kinase receptor-associated protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107907253
Spliceosome [BR:
ghi03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
107907253
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EIF3I
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_NWD2_C
WDR90_beta-prop_4th
NBCH_WD40
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
eIF2A
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
WD40_like
Motif
Other DBs
NCBI-GeneID:
107907253
NCBI-ProteinID:
XP_016690031
UniProt:
A0A1U8JIC7
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All DBs
Position
A05:2028556..2032538
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AA seq
349 aa
AA seq
DB search
MDKKKIAVPLVCHGHSRPVVDLFYSPVTPDGFFLISASKDSSPMLRNGETGDWIGTFEGH
KGAVWSVCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACAFSEDTHLLLTG
GVEKVLRIYDLNRPDAPPREVDKSPGSVRTVTWMHSDQTILSSCTDMGGVRLWDVRSGKI
VQTLETKSSVTSAEVSQDGRYITTADGSTVKFWDANHYGLVKSYNMPCTVESASLEPKYG
NKFVAGGEDMWVRVFDFHTGDEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWLTG
PLTHDGTEPFAANGSVGKVKVTAEDVSRKIEGFQIAEEGKTKEKETGKE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggataagaaaaagattgctgtcccacttgtatgccatggccattcacgtcccgttgtg
gatctcttttacagtcccgttacccctgatggttttttcctcatcagtgccagcaaagat
tccagtcctatgctgaggaatggtgaaactggagattggataggaacctttgaaggacac
aaaggtgcagtttggagtgtttgcttggatacaaatgccttacgagctgcttccgcttct
gctgatttttctgcgaaagtgtgggatgcactaacaggtgatgtcttgcactcatttgaa
cacaagcatatagttcgagcttgtgctttttcagaggatacacaccttctattgactggg
ggagtagagaaagtcctccgtatttatgacttgaatcgcccagatgcacctccaagagaa
gtggacaaatctcccggttcagtcagaactgttacatggatgcatagtgatcagacaata
ttaagttcttgcactgatatgggaggtgtcagattatgggatgtaaggagtggtaaaata
gttcaaacactagagaccaagtcatctgtgaccagtgcagaagtgagtcaagatggtcga
tatatcacaactgctgatggatctaccgttaagttctgggatgccaaccactatgggttg
gtaaagagctacaacatgccatgcacagttgaatcagcttcattggaaccgaagtatgga
aataaattcgttgccggaggagaggatatgtgggttcgtgtttttgatttccacactgga
gatgagatagcatgtaacaagggtcaccatggtcctgtgcattgcgtgcggttctcacct
ggaggagaatcatatgcctcgggttctgaggatggaacgattagaatatggctgacaggc
cctttgactcatgatggcactgaaccatttgcagcaaatgggtcggttggaaaggtgaag
gtaactgcagaagacgtttcacgcaagatcgagggcttccagattgcagaagagggcaag
actaaagagaaagaaacaggaaaggagtaa
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