Gossypium hirsutum (upland cotton): 107907289
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Entry
107907289 CDS
T04793
Name
(RefSeq) KH domain-containing protein HEN4-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107907289
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
107907289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_5
MOEP19
KH_N4BP1_2nd
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
107907289
NCBI-ProteinID:
XP_016690088
UniProt:
A0A1U8JN09
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All DBs
Position
D06:2803800..2808230
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AA seq
668 aa
AA seq
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MSAPLTPSKRPHDRNPSELNGKRKLQKSDQSKILSGGIVFRVLCPEAKSASVIGKDGTLI
SQILQETGANVKIEEAIPGCDEIVIAIMGSGSSDKDTEVGTVQGKEDGGDEADASNRSDE
EKGNDENNNDKALKSVNENSRVQEALLLVFERMAETERNSDGVDKETETVKSFTTVLRLL
VLSSQVGCLFGKGGSVIKQMSADSGAQIRILPRDKLPACASASYELVQIAGEFDAVRKAL
QSVSQQLIENPPRDHDSFPLNTTGQSSHSIGPRPEVHPPPNHSLSSQGAPFAAGPRDVEH
HSPLPPHMPGRMMPSLEMLTFRLLCHDDKVGAVIGKGGAIIKTLKQETGCDIKVVEAIPD
CEDRVIIVSSPAHPDDRISPAQDAVLRVLGRLFRAMPDGKDKTMMVRLLVSSNQIGCLLG
KGGAIIAEMRKSSGAHIRILGKDQVPKCASEGEEVVQINGDHETVRDAIMQITSRLRHHF
FRDMFPSINHPSNPGFMDQGPPFPSFMGRREFSPPVGPFHHFDAFGGPPPHGGFHPHDPP
FMRNIHRPGMPPHISERKPWGPQGYLGMPDFSGPPHRRISGFGGGSQPAVITSTTIEVVV
PRSLVPIIYGEDGACLKQIRQISDAKITITEPKPAATETAITISGTPEQTHAAQSLIQAF
VMSETEST
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctccattgacgccttctaagagaccacatgataggaacccttcagagctgaat
gggaaaagaaagttgcaaaagtcagaccaatctaaaattttatctggtggtattgttttc
cgtgtactatgtcctgaagctaaatctgctagtgtcattggcaaagatggcactttaata
tcacaaattcttcaagaaactggtgcaaatgtcaaaatcgaggaggctatccctggttgt
gatgagatagtaattgccatcatgggttccggatcttctgataaagatactgaagttggt
acggtgcaaggaaaggaggatggtggtgacgaggctgatgcatccaatcggagtgatgaa
gaaaagggaaatgatgaaaacaacaatgataaggctttaaaatctgtaaacgaaaattcc
cgcgtgcaggaggctttgttacttgtttttgaaagaatggctgaaacagagcgaaattcg
gatggagttgataaagaaaccgaaactgttaagtctttcacaacggttttaaggttgctt
gttctttccagtcaagttggctgcctttttggtaaaggtggcagtgtaattaagcaaatg
tctgccgacagtggggcacaaattcgaattcttcccagagacaaacttcccgcgtgtgct
tcagcttcctatgaattagttcagattgctggggagtttgatgcagttcggaaagctctt
caatctgtttctcaacagctaatagaaaatccacctcgggatcatgactcattccctctc
aacacaaccggacagtcatcccattctattggtcctaggcctgaagtccacccaccacca
aaccattctttaagttctcagggagcaccctttgctgcaggacctcgggatgttgagcat
cattcacctcttccccctcatatgcctggaagaatgatgccttctctggaaatgctaaca
ttccggttattgtgtcatgatgacaaagttggtgctgtcattggaaagggcggagcaata
attaagactcttaagcaagaaacaggctgtgatatcaaagttgtggaagctattcctgat
tgtgaggaccgcgtaattatcgtatctagtccggcgcacccagatgataggatatcacct
gcacaagatgcagttcttcgtgtactcggtaggttatttagggctatgcctgatggcaag
gacaagactatgatggttaggcttcttgtatcatcgaatcaaattggttgtctccttggc
aaaggtggcgccattatagctgaaatgaggaagtcatctggggctcatattcgaatattg
ggaaaggatcaggttccaaagtgtgcttccgaaggtgaagaagttgttcagattaatggt
gatcatgaaactgttcgagatgctattatgcaaataacatctaggttgcgacatcatttc
tttcgtgatatgtttccttctattaaccatccttcaaatcccggtttcatggaccaagga
cccccattcccttcgtttatgggaaggagagaattttcacctccggtaggtccttttcat
cattttgatgcttttggtggaccacctccacatggtggttttcacccccatgatcctcct
tttatgcgcaatattcatcgaccaggcatgcctcctcatatatccgaaagaaaaccatgg
ggtcctcagggatatttaggcatgccagatttctctggaccaccccaccgaagaatttcc
ggttttggaggaggaagccaaccggctgttatcacaagcacaactattgaagttgttgtt
cctcgttcccttgttcctataatttacggagaagatggcgcatgtttaaaacagatacgt
cagatttctgatgcgaaaattacaattaccgaacccaagcctgcagcaactgaaactgca
attacaatatctggaacacccgaacaaacgcatgcagctcagtctttaatacaggcattt
gtgatgagtgagactgaatctacttga
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