Gossypium hirsutum (upland cotton): 107907348
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Entry
107907348 CDS
T04793
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 17 isoform X1
KO
K15133
mediator of RNA polymerase II transcription subunit 17
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107907348
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Head
107907348
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Med17
DUF7813
PRMT5_TIM
Motif
Other DBs
NCBI-GeneID:
107907348
NCBI-ProteinID:
XP_016690182
UniProt:
A0A1U8JIQ0
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Position
D05:1673011..1677534
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AA seq
671 aa
AA seq
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MEGNLEISLDKLPVKRLDAIEENGLERYPPESSYDEKRVSLIRRIDFAWAVEEDEEKERK
KKQKKNSSKDASATWQWQSMVENLQLAHQELSVIIDLINTLEANDAVTVAGMTRPKPLPN
ELMSDLAVSAATKLQCYRHLGKYFKQSANALEQQIAREARFYGALIRLQQNWKVKRQRVA
GPGPASSNEGFSIDLFDNSLYSSTPMSRPSSLSSIRVEHDSAGMLSINLPPNSCHSLHFG
FLGVHSADIPKEFNKIRTHGSVGQHTRNTEKESMSDDEYVKETHLLLRDVHQSIFNDQVF
DMLNCEAFNQSVGVNVTGMRENYLQLSIGQGTSLFISLVPSSEGDNQAVDTANTQNVDSA
IVPLDSFDEVKFGERKHDTPTMKKKWGFPHRISCEIYLQQIVHEHAFLKAKDKPNLSGTP
VSGQSGKDGPGLLGHFCLSLAHRIFSSRVLIELENVVCRVPYLHLMTHPTWHSRKSSWTI
FMKVPQSILHAESQSPRSDFQNIKDVIKSQFHTKVVLSDDRINVEGEGAPNVVGLFKRSS
EDICSVNKYDCDLADLPVILLQQVASQVIRWLHEEALMVGIKTNRYFLSLAFDLEQGESV
SLVAHVDPEDIQGGISWWLVMEDGFAEDWKLQMEIYDGTPEYRKFLGHLNLDVLYSTMMD
LVTLSDGGGNH
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggaggggaacctagaaatctccttggataagcttcccgttaaacgcctcgacgccatc
gaggaaaacggcctcgagcgataccctcccgagtctagctacgacgagaagcgagtgtcg
cttatacggcgaatagacttcgcgtgggcggtggaggaagacgaagaaaaggagagaaag
aagaagcaaaagaagaatagttctaaagatgcctccgccacgtggcagtggcagagcatg
gtggagaatctccaattggctcatcaggagctttccgtcatcatcgaccttatcaacact
ttggaagctaatgatgctgtaacggtggctggcatgaccaggcctaagccattacctaat
gagcttatgtctgatcttgccgtatctgctgcaaccaagctgcaatgttaccggcatctg
ggaaaatacttcaaacagtctgccaatgctttggaacagcagattgctagggaagcaaga
ttttatggtgctctaatcagattgcagcaaaattggaaagttaaacgacagcgagtggca
ggtccaggcccagcttctagcaatgaaggcttctctattgatctttttgataattcatta
tatagttcaacaccaatgtctcgcccgtcttctttatcttctatacgtgttgaacatgat
tcagctgggatgttgtctatcaacttacctccaaattcatgccactctcttcattttggt
tttcttggtgtgcattctgctgatataccaaaagaatttaataagatcaggacccatggc
tcggttgggcagcacacaagaaacactgagaaagaatcaatgagcgatgatgagtatgtc
aaagaaacacatttgctccttcgcgatgttcatcaatcaatcttcaatgatcaggtattt
gacatgttgaattgtgaagcattcaaccaatctgttggagtcaatgtaactggaatgcga
gaaaattatctacaattgagcataggtcaaggaacctctctattcatatcacttgtgcca
tctagtgagggtgacaatcaggctgttgacactgccaatacgcagaatgtagattctgca
attgtacctttggactcgtttgatgaggtgaaattcggagaacgaaaacatgatactcct
acaatgaaaaagaaatggggtttccctcatcgtatcagttgtgaaatttatctgcagcaa
attgttcatgaacatgcatttctaaaagcaaaggataaaccaaatttatctggtactcca
gtatctggccaatcaggaaaggatggacctggtcttctgggtcatttctgtctgtctctg
gctcatagaatcttttcgagcagagttcttatagagctggaaaatgtggtatgcagggtt
ccatatctccatttaatgacccacccaacttggcattcacggaaatcatcttggacaatc
tttatgaaagttcctcagtccattcttcatgcagagtcccaatccccaagatcagacttc
cagaacattaaggatgttataaaatcacaatttcataccaaggtggtgctgagtgatgac
cgtataaatgttgaaggggaaggtgctcctaatgttgttggcctgttcaaaagaagctct
gaggacatatgttctgtaaacaaatatgactgcgacttggctgatcttcctgttatatta
cttcagcaggttgcaagccaagttattcgttggcttcatgaggaagctcttatggtggga
ataaaaacaaacagatattttctgagcttggcttttgatctagaacagggggagagtgtt
agcctggtggcccatgtggacccagaagacatacaaggcggcatctcttggtggttagta
atggaagatgggtttgcagaggattggaaacttcaaatggaaatttatgatggtacacct
gagtatagaaaatttttgggtcatttaaatttggatgtattatactcaacaatgatggac
ttggttaccttgagcgatggaggtggaaaccactga
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