Gossypium hirsutum (upland cotton): 107907349
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Entry
107907349 CDS
T04793
Name
(RefSeq) adagio protein 1
KO
K12115
clock-associated PAS protein ZTL
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
107907349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107907349
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107907349
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Kelch_2
Beta-prop_ATRN-LZTR1
Kelch_5
Kelch_6
Kelch_1
PAS_9
F-box-like
PAS
PAS_3
NANM
F-box
PAS_4
Motif
Other DBs
NCBI-GeneID:
107907349
NCBI-ProteinID:
XP_016690186
UniProt:
A0A1U8JIT2
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Position
A05:607301..611776
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AA seq
610 aa
AA seq
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MEWDSNSDLSGDEDEGFLLNDGAPVPFPIPTSLQTAPCGFVVTDALESDHPIIYVNTVFE
MVTGYRAEEVLGRNCRFLQCRGPFAKRRHPLVDSTVVSEIRRCLDEGIEFQGELLNFRKD
GSPLMNRLRLTPIYGDDETITHVIGIQFFTEANIDLGPVSVTSIKESLKSSDRSRSGFSA
FCPVVVGDRNVSRGLCGILQLSDEVLSLKILSRLTPRDIASVGSVCRRLYELTKNEDLWR
MVCQNAWGCETTRVLETVPGAKRLGWVRLARELTTLEAAAWRKLTVGGAVEPSRCNFSAC
AVGNRVVLFGGEGVNMQPMNDTFVLDLNSSNPEWQHVQVSSPPPGRWGHTLSCVNGSHLV
VFGGCGRQGLLNDVFVLDLDAKPPTWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADS
GVLLSDTFLLDLSMEKPVWREIPVAWTPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRS
SDVFTMDLSEEEPCWRCVTGSGMPGAGNPGGIAPPPRLDHVAVSLPGGRILIFGGSVAGL
HSASQLYILDPTDEKPTWRILNVPGRPPRFAWGHSTCVVGGTRAIVLGGQTGEEWMLTEL
HELSLASSVI
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggagtgggatagtaattctgatctgagtggagatgaagacgagggcttcttgctcaac
gatggcgcccctgttcctttccctattcccacctctctgcaaacagctccttgtggcttt
gtcgtcaccgatgctctcgagtccgaccatcccatcatttatgtcaataccgtctttgag
atggttaccggttatcgcgccgaggaagttcttggccgcaattgccgtttcttgcaatgt
agaggaccatttgcaaaaagacgacacccattggtggattccaccgttgtttcagaaata
cgaagatgccttgacgagggaattgaattccaaggcgagttgttgaattttagaaaggat
ggatctccattgatgaacagattgcgtcttacacctatatatggagatgatgagacaatc
actcatgttattgggatccagttcttcacagaggcaaacattgatctaggtccagtgtca
gtaacttctataaaggagtctttgaagtcatctgatcgttctcgatctggattttctgct
ttttgtcctgttgtagttggagaccgaaatgtctctcgtgggctttgtgggatattgcaa
ttgagtgatgaggtgctgtctctcaagatactttcacgattgacaccaagagatattgca
tcagttggttccgtctgtaggcgactttatgagctgacaaaaaatgaggatctttggcgg
atggtctgtcaaaatgcatggggttgtgagactactcgtgttttagagacggttcctggt
gctaagagacttgggtgggtaaggctggcaagggaattgaccactcttgaagcagctgca
tggaggaaacttactgttggaggtgctgttgaaccttcacggtgcaactttagtgcttgt
gctgttggtaatcgtgttgtgctttttggtggtgaaggggtaaacatgcaaccaatgaat
gacacctttgtgttggatctaaattcaagcaaccctgagtggcaacatgtccaggtgagc
tctcctccaccaggtcgttggggacatacactatcttgtgtaaatgggtctcatctggtg
gtattcggaggttgtggaaggcagggcctgctcaatgatgtttttgtgctagatttggat
gcaaagcctccaacctggcgagagatctcaggattggctccaccacttcctagatcatgg
cacagctcctgcactctcgatgggactaagctgattgtttctggtggttgtgcagattca
ggagtactgcttagtgatactttcctgcttgatctttcaatggaaaaacctgtgtggaga
gagatacctgtagcatggaccccaccttcacgcttgggtcacacactgtcagtatatggt
ggtaggaaaatactgatgtttgggggtcttgctaagagtggtccactccggttccgttcc
agtgatgtattcacgatggatttaagtgaagaggaaccatgttggagatgtgtaactggg
agtggaatgcctggtgctggaaatccaggtggcatagctccccctccaagactcgatcat
gttgctgtgagccttcctggtggaagaatcctcatctttggtgggtctgttgctggtctt
cactcagcttcccaactttatatcctggacccaaccgatgaaaaacctacgtggaggata
ctgaatgtgccagggcgacctccgaggtttgcttggggtcacagtacttgtgttgttggt
gggacaagggcgattgtactcggcgggcaaacaggtgaggagtggatgttaactgagctc
cacgaactatcgctggcaagttcggttatctga
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