Gossypium hirsutum (upland cotton): 107907386
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Entry
107907386 CDS
T04793
Name
(RefSeq) chromatin structure-remodeling complex protein BSH-like
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03082
ATP-dependent chromatin remodeling
ghi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107907386
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107907386
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107907386
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107907386
03036 Chromosome and associated proteins [BR:
ghi03036
]
107907386
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107907386
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107907386
SWI/SNF complex
107907386
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107907386
PBAF complex
107907386
SWI/SNF complex
107907386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
GP70
Motif
Other DBs
NCBI-GeneID:
107907386
NCBI-ProteinID:
XP_016690243
UniProt:
A0A1U8JNF6
LinkDB
All DBs
Position
D05:140946..146405
Genome browser
AA seq
240 aa
AA seq
DB search
MKSPASASWKAPLKFRMPTAENLIPIRLDIEVDGQRYKDAFTWNPYDPDSEVVMFAKRTV
KDLKLAPGFLPQIVQSIQSQLATFRSYEGQDMYVGDKIIPIKLDLQVNHTVIRDQFLWDL
NNFDSDPEEFARTLCKDLGIEDPEVGPAVAFAIREQLYEIAIQNVTSARENRISKKGRRA
AEHFTPSKASGAALDLMKLFSFRSSVVRKRKEWDYYKPVLDLLSNEEVDALEAKEERSGR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgccggcgtcagcttcatggaaagcccctctaaagttcaggatgccaacagct
gaaaatttaatacccattaggcttgacatagaagtcgatggacagcgctataaagatgct
ttcacttggaacccttatgatccggattcagaggtggtgatgtttgcaaaaaggactgta
aaagacttgaagcttgcccctggtttccttccgcaaattgttcaatccattcagtcacag
cttgccacctttcgatcatatgaaggtcaagacatgtatgttggtgacaagatcattcca
attaagcttgatcttcaagtcaatcatacagttatcagggatcagtttttatgggacttg
aacaactttgatagtgatcctgaagaatttgctagaactctgtgcaaagatttaggtatt
gaagaccctgaagttgggcctgcagttgcctttgcaatcagggagcaactttatgagatt
gcaattcaaaatgtaacttcagcaagggagaacagaataagcaaaaagggtcgtcgggct
gctgaacatttcactcccagtaaagctagtggtgctgcactggacttgatgaagttattc
agtttcaggtcaagtgttgtccggaaaagaaaggagtgggattattataaacccgttctt
gaccttttatctaatgaggaagtagacgctctcgaagccaaagaagaaaggagtggccgg
taa
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