Gossypium hirsutum (upland cotton): 107907467
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Entry
107907467 CDS
T04793
Name
(RefSeq) preprotein translocase subunit SCY1, chloroplastic
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03060
Protein export
ghi04141
Protein processing in endoplasmic reticulum
ghi04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
107907467
04141 Protein processing in endoplasmic reticulum
107907467
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107907467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107907467
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ghi02044
]
107907467
Membrane trafficking [BR:
ghi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
107907467
Secretion system [BR:
ghi02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
107907467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Motif
Other DBs
NCBI-GeneID:
107907467
NCBI-ProteinID:
XP_016690354
UniProt:
A0A1U8JPX6
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Position
D05:727463..731112
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AA seq
542 aa
AA seq
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MLITVREASSWPLTFNLSSFSSPKPSPILKNSVCRASLSVHPKPTSNSQSWNLSLLSNSQ
KGSVFDPLGINPDESSGLNRVWDSFLSLLTPTFESTSGTRKEKSSSARGVAAAIEDSSIE
FGDFFKGPLPGKFLKLLAFLALSRLGVYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGI
GRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKREGEAGRKKILQYTRYASVGFAIVQ
AIGQVLYLRPYVNDFSTQWVLSSVTLLTLGAVLTTYIGERISDLKLGNGTSLLIFTNILS
YLPASFGRTVAQAYQDGNYVGLVAIIISFFLLVLGIVYVQEAERKIPINYASRYTSRSGG
LQKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGISVLKKAAVALNPGGSFYLPTNI
LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSVFLA
ILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDFDKY
SP
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgttgataacggtcagggaagcttcttcttggcctctcaccttcaacctctcctctttc
tcttctcctaagccttctccaatactcaaaaactctgtttgcagagccagtttaagtgtt
catccaaaacccacctccaattcccaatcatggaaccttagtcttctttctaacagccaa
aaaggatctgtttttgatcctttgggtatcaacccagacgagtcttcaggtttaaatcgt
gtttgggatagttttctatccttgttaacacctacatttgagagtacctcaggtactaga
aaggagaaatcttcttcggctagaggagtggcagctgcaattgaggacagttccattgaa
tttggggatttcttcaaaggcccattaccaggaaaatttctcaagcttttagcatttttg
gctttatctcgtcttggagtttatatacctctgggaggggttaaccgagaggctttcgtt
ggcaatttggatcagaacagtctactaagcactttggattcgttctccggaggaggcatt
ggtagacttggtatatgctcccttggtattgttccttttattaacgctcaaatcgtgttt
caactcctcgcccaagtttaccctaaattgcaagatcttcagaaaagagaaggtgaagct
ggaagaaagaaaattttgcaatatactagatatgcctcggttggttttgctatagtacag
gcaattggccaagtactttaccttcgtccatatgtcaacgatttcagcacgcagtgggtt
ctctcctctgttactttattgacacttggtgctgtactgacaacatatattggggaacgg
atttctgatctaaagcttggaaacggcacatctcttttaatatttacgaatattctatcc
tacttgcctgcatcttttggaaggacagttgcacaagcatatcaggatggtaactacgtt
ggacttgttgccatcattatctcgttcttcctgctggtacttggcatcgtttatgttcag
gaagcagagaggaagattccaatcaactatgcctcaagatacaccagcagaagcggagga
cttcaaaaatctgcttacctaccctttaaggtaaacagttccggagtgatgccgattata
ttttctacatcatccctagctcttcccggtactttagcacgatttactggcatatctgtt
ctaaagaaggctgcagttgctctgaatcccggaggttctttctaccttcctaccaatatc
ttgttgatagccttttttaattactactacactttcctacaactggaccctgatgatgtt
agtgaacaactgaagcggcaaggtgcttcgattccactggtccgacctggtaaaagtaca
gcagcatttttaaagacggttcttagtcggatatcggttctgggttcagtatttttagca
atcttggcagctggtcctgccgtgatcgagcaaaccacacacttgactgcattccgagga
tttgcgggcacttcagttcttattcttgtgggatgtgcaactgatactgcaagaaaagtt
caagcagagattatatcccaaaagtacaagaacatagagttttacgacttcgacaagtat
agcccgtaa
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