KEGG   Gossypium hirsutum (upland cotton): 107907498
Entry
107907498         CDS       T04793                                 
Name
(RefSeq) DNA polymerase epsilon subunit B-like
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03030  DNA replication
ghi03410  Base excision repair
ghi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    107907498
   03410 Base excision repair
    107907498
   03420 Nucleotide excision repair
    107907498
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ghi03032]
    107907498
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107907498
Enzymes [BR:ghi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     107907498
DNA replication proteins [BR:ghi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    107907498
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      107907498
SSDB
Motif
Pfam: DNA_pol_E_B Dpoe2NT CcmE
Other DBs
NCBI-GeneID: 107907498
NCBI-ProteinID: XP_016690386
UniProt: A0A1U8JJC4
LinkDB
Position
A05:531175..534809
AA seq 525 aa
MSGQTRKKIQKKLKIRGYSLKTDGLDEILSFVNRFQDAEDEAIDLLLDQLDHQSLISSII
DKEAVHQVVSLLLEAEAAEEESPSSSHSSIRVVDAFLIPKFRYDPIKKHFFQHAGSLPIH
GEASAKAALYRDRLLLLFQRVSRDQHFIKPAFDTDVDTSPSCQLSTIQSLVGQRGRRWVM
GVISQLEDGHFYLEDLTAAIEIDFSKAKITTGFFTENTIIVAEGEMLSEGIFQVITCGFP
PLENRDKSLKVLAGHDFFGCGTLTKEETLRLADLEKRAVNDMFVILSDIWLDNEQVMEKL
ETVLNGFENVEIVPSLFVFMGDFCSHPCNLSFHSFSSLRSQFGKLGRMIEAHPRLKEQSK
FLFIPGPNDTGPSTVLPRCALPKYLTEELQKHVPNAIFSSNPCRVKFYTQEMVFFRQDLL
YRMRRSCLIPPSTEETDDPFEHLVATITHQSHLCPLPLFVQPIIWNYDHCLHLYPTPHTI
VLGDRSEQKAFKYTGITCFNPGSFSDDSTFVAFRPCTQEVEFSAL
NT seq 1578 nt   +upstreamnt  +downstreamnt
atgagtgggcaaactcgtaagaagattcaaaagaaattgaagataagaggatacagcttg
aagacggatggtcttgatgagattctctccttcgtcaatcgcttccaagatgctgaagat
gaggctatcgacctcctcctcgaccagctcgatcaccaatccttgatatcttccataatc
gacaaggaggcggtgcaccaagtagtcagtcttctattggaagctgaagcagctgaggag
gaatccccttcttcttctcattcctcgatccgcgttgttgatgcctttcttatccccaaa
tttagatacgatcccatcaagaagcatttctttcaacatgcgggtagtctacccattcat
ggggaagcttctgcaaaagcagctctttatagagacaggttattgttgttgttccaaagg
gtttctcgtgatcagcattttattaaacctgcatttgatactgatgttgatacctctcca
agctgtcagctatcaacaatacagtctctggttgggcaaagagggaggagatgggtgatg
ggtgtcatctcccagttggaggatggtcatttttacttggaagaccttactgctgctatt
gaaatagacttctccaaagcaaagataactacaggatttttcaccgagaacactataatt
gtagcagaaggtgaaatgctttctgagggaatttttcaggtaattacatgtggctttcct
cccttagagaacagagataaatcactcaaagtacttgctggacatgacttctttggttgt
ggtacactaacaaaagaggagacgctcagacttgcagatttggaaaagagagcagtaaat
gacatgtttgtcatactatctgacatttggctggacaatgaacaggttatggaaaagctg
gagactgtccttaatggatttgagaatgtggaaatcgttccttccttatttgttttcatg
ggagatttttgttctcacccatgcaatctctcctttcattctttctcaagtctcagatcg
caatttggaaaattaggccgaatgattgaagcccatccccgactgaaagaacagagcaag
tttctgtttattccaggtcccaatgatacaggtccatcaactgttttacctcggtgtgct
ttaccaaaatatctaactgaagagctccagaagcatgttccaaatgccatattttctagt
aatccctgcagggtaaagttctacacgcaggaaatggtcttctttcgtcaagatctactg
tatagaatgcgacgttcttgtttgattcccccttccactgaagaaacagatgatcctttt
gaacatcttgttgcaaccattacccatcaaagtcatctctgcccactgcctctctttgta
caacccatcatttggaattatgaccattgtctccatctatatccgactccacatacgatc
gttttaggtgatagaagtgagcagaaggcattcaagtatactggaattacttgcttcaat
ccaggttccttctcagatgacagcacatttgttgcatttagaccttgcactcaggaagtt
gagttttcagccttgtga

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