Gossypium hirsutum (upland cotton): 107908563
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Entry
107908563 CDS
T04793
Name
(RefSeq) YTH domain-containing protein ECT1 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107908563
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107908563
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Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
107908563
NCBI-ProteinID:
XP_016691259
UniProt:
A0A1U8JSK5
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Position
D02:complement(71935927..71940505)
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AA seq
586 aa
AA seq
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MAGEMTLENRILCFSSDYMLCLPSEPINAVPKSEAVPKLAEQDANSGKIGVASDLTSTIS
SSPYESSGAKAESHQDLVGEPGFNQSTSFENYYYPGYDGSFTQSDDKGYFLTDGSLTGVQ
SENGSLVYYLPGYNPYATGALMGVDAQCLGQQPYYSSGYFQPPVSYASEAMPCYSWDSTY
AGDVSNGILDGFGNVKYGSGSAFAKSNGFNSTKSNGLGTKLSKSAYAQPNKPLSKGPHSG
SDPSAGSYRGYYPAGRSSFNNQKQGLSQYNGHMNYRQNGRTWNQNDRYKKSNVDFETSAE
LTCGPRALNRAAPLDSSVKKEGLGLNLYKDKYNLQDFPTEYENAKFFVIKSYSEDDVHKS
MKYNVWSSTPNGNRKLDAAFHEAETRESETGTKCPIFLFFSVNGSGQFVGLAEMIGKVDF
NKDMDFWQLNKWNGFFPVTWHVIKDIPNKELFHIILENNENKPVTHSRDTQEIGLKQGLE
LLRIFKGYSEKSSLLHDFGFYENREKTLDAKKNYKPATLEYMEDDLTKQTKAGDREVEEE
LRRTKKTGDATSIINLTKKLSLSGCNRKSVAVKNPIASSFPTVPAP
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggccggtgaaatgactttggagaatcgtatcctttgcttcagttctgattatatgtta
tgccttccttctgaacccatcaatgcggttccgaagtctgaagctgttcccaaattggct
gagcaggatgcgaattctggaaaaattggagtggcatctgatttgacttccacaatatct
tcttcaccatatgaatcttctggtgcaaaagctgagagtcatcaagacttggttggagaa
cctggtttcaatcaatctactagctttgaaaattattactacccaggttatgatgggtca
ttcactcaatctgatgataagggttattttcttaccgatggttcacttacaggtgtgcaa
tcggaaaatgggtccttggtctactatttgcctggctataacccatatgctactggggct
ctaatgggtgttgatgcgcaatgccttggtcaacaaccatattattcatctggatatttt
cagcctcctgtttcctatgcatcagaagccatgccttgttactcatgggattcaacatat
gctggagatgtttcaaatggaatccttgatggttttggaaatgtaaaatatggttctggc
tctgcttttgcaaagtcaaatggtttcaactcaacaaaatctaatggccttggtactaaa
ctatcgaaatctgcttacgctcagcctaacaaaccactaagcaaggggcctcattcaggt
tctgatccatccgcaggatcttataggggatactacccagctggaagatcttcatttaac
aaccaaaagcaaggtctttcccaatacaatggtcatatgaactacagacagaatgggaga
acatggaatcaaaatgataggtataagaaatccaacgttgactttgaaacctctgctgaa
ctaacttgtggtccaagggccttaaacagggctgccccgttggactcttctgttaagaag
gaaggcctgggacttaacttatataaagataaatacaacctacaagatttcccaactgag
tatgaaaatgcaaagttctttgtcattaagtcctacagcgaggatgatgtccacaaatcc
atgaagtataatgtgtggtcaagtactccgaatggcaataggaagctagatgcagcattc
catgaagctgaaactagagaaagtgagactggcaccaaatgtcctatctttctttttttc
tcggttaatggaagtggacagtttgttggcttagctgagatgattggcaaggtggacttc
aataaagatatggacttctggcaactgaacaagtggaatggtttcttccctgttacgtgg
catgttataaaagacatccctaacaaggagctcttccacatcatcctagaaaacaatgag
aacaaacctgtaactcatagtagggacactcaagagattggtctcaagcaaggcttagaa
ctgctcaggatttttaaaggctattcagaaaaatcatcattgttacatgactttggattt
tatgaaaatcgagagaagacacttgatgcgaaaaagaattacaagcctgctactctagaa
tacatggaagatgatttgactaagcaaacaaaagcaggagacagagaagtggaagaagag
ttgaggaggaccaagaaaactggagatgcaacatccatcatcaatctcaccaaaaaacta
tccctcagcggctgcaatcggaagagcgtcgctgtgaagaacccaatagcaagttcattt
cctaccgtccctgcaccatag
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