Gossypium hirsutum (upland cotton): 107908645
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Entry
107908645 CDS
T04793
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107908645
Spliceosome [BR:
ghi03041
]
Common components
Common spliceosomal components
General mRNP proteins
107908645
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
107908645
NCBI-ProteinID:
XP_016691365
UniProt:
A0A1U8JM59
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Position
D02:complement(71287868..71296707)
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AA seq
578 aa
AA seq
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MDFDEYEYLEKTVENPEHQKVKKEDGNGRVDNVKSEEKIRSGSSKHKREERVDDYDDYRS
HSKRSKSREESLYDHDRHKERGSSRHRSRSRDGEKDRHRSSREDRVKDRDKGERNGRDKE
KERERDRKEHDRERERGRERERERSSRSRSQSEREREMSRDREFREREKEREPRERDRES
RRYRDKKEDGGEAEVDPERDQRTVFAYQITLKASERDIYEFFSRAGKVRDVRLIMDRNSR
RSKGFAYVEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLAQSTTSVAAGQIGSHAG
GARRLYVGNLHFNITEDQLRQVFESFGTVELVQLPLDETGHSKGFGFVQFARLEDAKNAL
NLNGQLEIGGRVIKVSTVTDQGPLQDVGTNADDLDDDEGGLSLNSSSRALLMAKLDRSGT
ASSITGSVGMPVNNTGLGAAPSAQPLVSPTIQASMPTIPGLPGGLQIPTNGIPAIDIIGT
PSECLLLKNMFDPSLETEPDFDLDIKEDVQEECSKFGKLKHIYVDRNSAGFVYLRFEDAQ
GAINAQRNLHGRWFAGKMITATYMIPQTYEAKFPDSNR
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggattttgatgaatatgagtatttagaaaagacggttgaaaatcctgagcatcaaaag
gtgaagaaggaagatggtaatggtagagttgataatgttaagtctgaagagaagattcga
agtgggagttcaaagcataagagggaggagagagtcgatgattatgatgattatcgaagt
cattccaaacgttcaaaatcacgagaggaatcattgtatgatcatgaccggcataaggaa
cgaggctcttctcgtcacaggtcacggtctagagatggtgagaaggataggcacaggagt
agcagagaagatagagtcaaagacagggacaagggggagaggaatgggagagataaagag
aaggaacgcgaacgagataggaaagagcatgatcgtgagagggaaaggggaagggaaagg
gagagagagcggtcaagtagaagcaggagtcaatcagaaagagaacgagagatgagtcgt
gaccgggagtttagagaaagagaaaaggagagagagccaagggaacgagaccgagagagc
aggaggtacagagacaaaaaggaagatgggggagaggctgaggttgatccagaaagggat
cagagaactgtatttgcttatcagataaccttgaaggctagtgaaagagatatttatgag
ttcttctctagggctggcaaggtacgagatgttcgcctcataatggatcgaaattcaaga
cgttcgaagggatttgcgtacgttgagttctatgatgtgatgtcagtccctatggcaata
gcactctctggccagcctcttcttggtcaaccagtgatggtgaaaccatcagaagctgaa
aagaatcttgctcagtcaactacatctgtggcagctggacagataggttcacatgctggt
ggagcgagaaggttgtatgttggcaacctacatttcaacattacagaagatcaacttcgt
caggtttttgaatcttttggtactgtggagctggttcagttgccccttgatgaaactggt
cattctaaaggttttggttttgtccagtttgcccgactggaagatgctaagaatgcattg
aatttgaatggacaactggagattggaggtcgagtaatcaaggtttcaactgttactgat
caaggtccattgcaagatgttgggacaaatgctgatgatcttgatgatgatgaaggtggc
ttgtccttgaattcatcatctcgagcacttctcatggcaaagttggaccgcagtggcact
gcctcaagtattactggctctgtaggcatgcctgttaataacactggcctcggtgctgca
ccttcggcgcaacccctagtttctcctaccatacaggcttctatgcctactattcctggg
cttccaggtggtctacaaatccctactaatggcatccctgctatcgacataattggaacc
cctagcgaatgcctattattgaagaatatgtttgatccaagtctcgagactgaacccgat
tttgatttggatatcaaagaagatgttcaagaagaatgttcaaaattcggaaaattgaag
catatatatgtggacaggaatagtgctggttttgtatacttacgatttgaagatgcgcaa
ggcgcaataaatgcgcaacggaacttacatggaagatggttcgccggaaaaatgatcacg
gcaacatacatgatacctcaaacctacgaggcaaagtttccagatagtaacagataa
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