Gossypium hirsutum (upland cotton): 107908713
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Entry
107908713 CDS
T04793
Name
(RefSeq) chromatin structure-remodeling complex protein BSH isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03082
ATP-dependent chromatin remodeling
ghi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107908713
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107908713
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107908713
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107908713
03036 Chromosome and associated proteins [BR:
ghi03036
]
107908713
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107908713
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107908713
SWI/SNF complex
107908713
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107908713
PBAF complex
107908713
SWI/SNF complex
107908713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
107908713
NCBI-ProteinID:
XP_016691451
UniProt:
A0A1U8JMF6
LinkDB
All DBs
Position
D09:complement(44133456..44139707)
Genome browser
AA seq
329 aa
AA seq
DB search
MKSPASASWKAPLKFRMPTAENLIPIRLDIEVDGQRYKDAFTWNPYDPDSEVVMFAKRTV
KDLKLSPGFLPQIVQSIQSQLATFRSYEGQDMYVGDKIIPIKLDLQVNHIVIRDQFLWDL
NNFDSDPEEFARTLCKDLGIEDPEVEPAIAFAIREQLYEIAIQNVTTARENRISKKGRRA
AEHFTPRFLCCFLLIWSEIGGIFFLIRMACKASGAALDLMKLFSFGSSVVRKLQKKKILM
VCLLLSVASGKERSGIIINPFLTFYLMRTYMLSKPKKKGVADPDSEVVMFAKKDCKRLEA
CQRTTILYINLLWYSLPLLGSVGFFVHFI
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgccggcgtcagcttcatggaaagcccctctaaagttcaggatgccgacagct
gaaaatttaatacccattaggcttgacatagaagtcgatggacagcgctataaagatgct
ttcacttggaacccttatgatccggattcagaggtggtgatgtttgcaaaaaggactgta
aaagacttgaagctttcccctggtttccttccgcaaattgttcaatccattcagtcacag
cttgccacctttcgatcatatgaaggtcaagacatgtatgttggtgacaagatcattcca
attaagcttgatcttcaagtcaatcatatagttatcagggatcagtttttatgggacttg
aacaactttgatagtgatcctgaagaatttgctagaactctctgcaaagatttaggcatt
gaagaccctgaagttgagcctgcaattgcctttgcaatcagagagcaactttatgagatt
gcaattcaaaatgtaactacagcaagggagaacagaataagcaaaaagggtcgtcgggct
gctgaacatttcactcccaggtttttgtgctgtttccttctaatatggtcagaaatagga
gggattttttttcttatccgaatggcttgtaaagctagtggtgctgcactggacttgatg
aagttattcagttttggatcaagtgttgtccgaaaacttcaaaagaagaaaatacttatg
gtttgccttttgctttctgttgcatcaggaaaagaaaggagtgggattattataaacccg
ttcttgaccttttatctaatgaggacgtacatgctctcgaagccaaagaagaaaggagtg
gctgatccggattcagaggtggtgatgtttgcaaaaaaggactgtaaaagactcgaagct
tgccaaagaacaactatcctatacatcaacctcctttggtattctctgcctttgttgggc
tctgttggtttcttcgttcactttatctga
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