Gossypium hirsutum (upland cotton): 107908740
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Entry
107908740 CDS
T04793
Name
(RefSeq) protein SHOOT GRAVITROPISM 6-like isoform X1
KO
K24816
maestro heat-like repeat-containing protein family member 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
107908740
Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
Other domain-containing proteins
HEAT repeat domain-containing proteins
107908740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Maestro_HEAT
HEAT_2
HEAT
HEAT_EZ
Cnd1
Cohesin_HEAT
RTP1_C1
Adaptin_N
Tti2
MOR2-PAG1_C
Motif
Other DBs
NCBI-GeneID:
107908740
NCBI-ProteinID:
XP_016691488
UniProt:
A0A1U8JRV1
LinkDB
All DBs
Position
D09:44466322..44487748
Genome browser
AA seq
1705 aa
AA seq
DB search
MASSSSLGSSIPAPEAVQVLVSSLADESPMVREASMASLKDISPLNPLLVLDCCSAVSRG
GRRRFGNMAGVFQVMAFGVRALDKNDIDASYIGKLAKIATAEIISSKELNADWQRAAASL
LVAIGSHLPDLMMEEIFLHLSGPSSALAAMIQILADFASADALQFAPRLKGVLSRVLPIL
GNVRDAQRPIFANAFKCWCQAVWQYNVDFPSNSLIDGDVMSFLNSAFELLLRVWAGSRDL
KVRVSSVEALGQMVGLITRTQLKTALPRLIPTILELCKKDQDIALIATSSLYNLLNVSLL
SETGPPLLEFEELTVILSTLLPVICMDNDGKEHSDFSVGLKTYNEVQRCFLTVGSIYPED
LFSFLLNKCRLKEEPLTFGALCVLKHLLPRSSEAWHNKRPLLVDAVKSLLDEQSLGIRKA
LSELIVVMASHCYLVGPTAELFVEYLVRHCALSEQDRIDLERSQAKVGLICPTELRAICE
KGLLLLTITIPEMEHVLWPFLLKMIIPRDYTGAVAMVCRCIAELCRHRSSYNNNMLDDCK
DRSDIPNPEELFARLVVLLHNPLVREQRATQILTVLCYLAPMFPRNINLFWQDEIPKMKA
YVSDPEDLKLDPSYQETWDDMIINFLAESLDVIQDIDWVISLGNAFTKQYALYTPDNEHS
ALLHRCLGILLQKVNDRAYVRGKIDWMYKQANITIPTNRLGLAKAIGLVAASHLDTVLDK
LKNILDNVGQSIFQRFLSLFSESYRTEESDDVHAALALMYGYAARYAPSMVIEARIDALV
GTNMLSKLLHVRHPTAKQAVITAIDLLGRAVINAAENGAPFPLKRRDQLLDYILTLMGRD
ESDDFADSSLELLRTQALALNACTTLVSVEPKLTIETRNRVMKATLGFFALPNDPIDVIN
PLIDNLITLLCAILLTSGEDGRSRAEQLLHILRQIDQYVSSHMDYQRRRGCLAVYEMLVK
FRMLCVSGYCALGCRGSCTHSKQIDRTLHGNFSNLPSAFVSPSREAVSLGDRVIMYLPRC
ADTDSEVRKLSAQILDQLFSISLSLPKPLGSSVGGDIELCYGALSSLEDVIAILRSDSSI
DPSEVFNRIVASVCILLTKDELVDTLHGCMPAICNRIKQSAEGAILAVIEFVTKRGAELS
EANISRTAQSLLSAAGHVTEKQLRLEVLGAISSLSENTNEKVVFNEVLTAAARDIVTKDI
SRLRGGWSMQDAFHAFSQHIVLSVLFLEHLISVLNQTRVTKSDPGKGENSILLSETQLAD
DILQAAIFALTAFFRGGGKVGKRAVEQRYSSVLAALILQFGKCHGLANSGQHEPLRALLT
AFQAFCECVGDLEMGKILARDSEQNEKEKWINLIGNLAGCISMKRPKEVENLCKIFTKSL
NLQENFQREAAAAALSEFVCYSSGFSSTLEEMVEVLCRHVSDESPTVRCLCLRGLVKIPS
VHIYRHTTQVLGVILALLDDLDESVQLTAVSCLLMILETSPKDAVEPILLNLSVRLRNLQ
ISMNVKMRADAFAAFGALSNYGIGAHKDAFLEQIHATLPRLILHLHDDDLAVRHACRNTL
KRFAPLMEIEGLLALFDSHRINSDHRSAYEDFVRDFTRQFVQHLSSRVDTFMASTIQALN
APWPIIQANAIYVSSSILSLSDDPSILALYHAQVLGMLVGKMSRSADAVVRARSSLAFSL
LLKSTNLISWRAARLDQADSARKGS
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcgagctccctcgggagctcaattccggctccagaggccgttcaagttctc
gtctcatcactcgcggatgaatctcccatggtgagagaagcctccatggcttctcttaaa
gacatctctcctttgaatcctcttctggtgctggactgttgctccgctgtttctcgaggc
ggccgtaggagatttggtaatatggctggagtgtttcaagtaatggcattcggagttcga
gctttagataaaaacgacattgatgcttcttatattggcaagcttgccaaaattgctacc
gctgagattatctcctccaaggaactcaatgcagattggcaaagggcagcagcaagtctg
cttgttgcaataggctcacatctgcctgaccttatgatggaagaaatatttctccatttg
tcagggccaagctcagctttggcggctatgattcaaatacttgcagactttgcttctgct
gatgctttgcagttcgctccgcgtttgaaaggcgtactttctcgagttttgcctattctt
gggaatgttagagatgcccaacggccaatatttgcaaatgcttttaagtgctggtgtcaa
gctgtctggcaatataacgttgatttcccttcaaattccctgattgatggtgatgtcatg
tcatttctgaactctgcttttgaacttttgttaagagtctgggctggttcacgagatctt
aaggttcgagtatcatctgtggaagcattaggccaaatggttggtcttatcacccgcacg
caattaaagacagctttaccaaggcttatccctactatattggagttgtgtaaaaaggat
caagatattgcacttattgcaacctctagtctctataatctcctaaatgtttccttactt
tcggagacaggccctcctttgcttgaatttgaggagctcacagttatattatcaacactc
ctccctgtcatctgcatggataatgatggcaaagagcactcagatttttctgtgggactg
aagacatacaatgaagtacagcgctgctttttgactgttggctctatataccccgaggat
ttgttttcctttcttctgaataaatgcagattaaaggaagagcctttaacttttggtgca
ctctgtgttttgaagcatcttttgcccaggtcatctgaagcttggcacaataagaggcca
ttgctagtggatgctgtgaagtccttgctagatgagcaaagcttaggcattcggaaggct
ctctccgagttgattgtggtgatggcttcacattgttacttagttgggccaactgcagag
ttgtttgtcgaatatcttgtacgccactgtgctttatcagaacaggatagaattgatctt
gaaaggtcccaggcaaaggtaggattaatttgtccaaccgaattaagagcaatatgtgaa
aaaggtcttcttcttctaactatcacgattcctgaaatggagcatgttctttggcctttt
ctattgaagatgattattccacgggattatactggtgcagttgccatggtatgcagatgc
attgcggaattatgcagacatagatcttcttataacaataatatgcttgatgactgtaaa
gatcgtagtgatattccaaaccctgaggagctgtttgcacgtttggtggttcttttgcac
aatcctttggtgagggagcagcgggctactcagattctgacagtcctctgttatttggca
cctatgtttccaaggaacatcaacttgttttggcaagatgagattccaaaaatgaaggca
tatgttagtgacccagaagatctaaagctggatccttcctatcaagagacctgggatgac
atgataatcaattttcttgcagaatctttggatgtgattcaagacattgattgggtgatt
tctctgggaaatgcttttaccaagcaatatgcactttatacacctgataatgaacattca
gcactccttcaccgatgccttggtattcttcttcagaaagttaatgatagggcttatgtt
cgtggaaagatcgactggatgtacaagcaggctaatattactattcccaccaaccggctt
ggtttagcaaaagccattggattggttgcagcatcccacttggatacggtgttggataag
ctgaaaaacattctagataatgttggtcaaagcatattccaaaggtttttatcattattc
tctgaaagttatagaacagaagaatctgatgatgtacatgctgctttagctctgatgtat
ggatatgctgcaagatatgctccctcaatggttattgaggctagaatagatgcccttgtt
gggacaaacatgctttcaaagcttcttcatgtacgtcaccctacagcaaagcaggctgtt
attacagctattgatttactaggtcgtgctgtcattaatgctgccgaaaatggtgcacca
ttcccactgaaaagaagagaccagttgcttgactatattttaactttaatgggtcgagat
gaaagtgatgattttgctgattccagtcttgaacttctgcgcacccaggctcttgctttg
aatgcctgtaccaccttggtttcagtggagccaaagttgactattgaaacaagaaatcgt
gttatgaaggctactttggggttctttgctttgccaaatgatccaattgatgttatcaat
ccccttattgataaccttatcactctcctatgtgccattcttctcacaagtggagaggat
ggaagaagccgagccgagcagctattgcacatattaagacaaattgatcaatatgtttct
tcacatatggattatcaaagaagaagaggttgtctcgcagtatatgagatgcttgtcaag
ttccgaatgctctgtgttagtggctattgtgcattaggctgtcgtgggagttgcacacac
agcaagcaaattgatcgtactctgcatggaaacttttccaacttaccatcggcatttgta
tctccgagtcgtgaagctgtgtctttgggagatagagtcataatgtatcttccacgctgt
gcagatactgattctgaagttagaaaactttccgctcagattcttgatcaactgttcagc
atctctctttcacttccaaagcctcttggttctagtgttggtggtgatattgagttatgc
tatggtgctttatcttcccttgaggacgtaatagccatcttgagaagtgattcttcaatt
gatccctcagaggtttttaacagaattgtcgcttctgtctgtattcttttgacaaaggat
gagcttgtagacaccctgcatggttgcatgccagcaatttgcaacaggatcaagcagtca
gctgaaggggccattctagctgttatagagtttgtgacaaagagaggggctgagctgagt
gaagctaatatctcaaggactgctcaatctttgctgtcagctgcagggcatgttactgag
aagcaattacgtttagaagttcttggagctatatcctctctatctgagaacacaaatgaa
aaagttgttttcaatgaagtgttgactgctgctgcaagggatattgtcacgaaagatata
tctaggctacgtggtggctggtcaatgcaagatgcattccatgcattttcacaacatata
gtgctgtcagttctgttcctggagcatctgatctctgtacttaatcagactcgtgtcact
aaaagtgatccaggaaaaggagaaaactctattcttctttctgaaactcagttagcagat
gatattctgcaagctgctatttttgctctcaccgccttcttcaggggtggcggtaaagtt
ggaaagagagctgttgaacagaggtactcttcagttcttgctgcacttatactgcaattt
ggaaagtgtcatggtctagctaattctggtcaacatgagccactacgtgcacttttaact
gcatttcaggccttctgtgaatgtgttggagaccttgaaatggggaagattttggctaga
gatagcgagcaaaatgaaaaggaaaagtggattaatcttattggaaatttagctggctgc
atttctatgaagagaccaaaagaggttgagaatctatgtaagattttcacgaaatcattg
aatcttcaagagaactttcaacgggaagctgctgctgctgcattatcagagtttgtttgc
tacagtagcgggttcagctccacattggaggagatggtggaagtgttgtgcagacatgtc
tctgatgaatctccaacagttagatgcctttgtctacgaggattggtgaagatcccatct
gttcatatctatcggcatacaactcaagttcttggtgtaatattagcattgcttgatgat
ttggatgaatcagtgcaactaactgctgtttcatgcttactcatgattcttgagacatcc
cccaaagatgctgttgaacccattttacttaatttgtctgttcggcttcgcaatctacag
atatccatgaatgtaaagatgcgggctgatgcctttgcagcatttggagcacttagcaac
tatggaattggggcacataaagatgcttttcttgagcagattcatgctacactcccacgc
ttgatcctccacctacatgatgatgaccttgctgttagacatgcctgccgtaacaccctg
aagcggtttgcccctttaatggagatagaagggttgctggctttatttgattcacatagg
attaactctgaccatcgaagtgcttacgaggacttcgtaagagattttacaaggcagttt
gtgcagcatctttcttccagagttgatactttcatggcatcaaccatacaggctttgaat
gcgccatggccaataatccaagcaaatgctatttatgtttccagcagcattctctcgctt
tcggatgatccgagcattttggctctttaccatgcacaggtgcttggaatgttggttggc
aagatgagtcggtcggcagatgcggtggttagagctagaagctctttagctttcagttta
ttactaaaatcaactaatttgatttcctggagagcagctcgacttgatcaagctgactct
gccagaaagggatcataa
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integrated database retrieval system
