Gossypium hirsutum (upland cotton): 107908866
Help
Entry
107908866 CDS
T04793
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107908866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
107908866
NCBI-ProteinID:
XP_016691639
UniProt:
A0A1U8JTP1
LinkDB
All DBs
Position
D02:complement(69497257..69499613)
Genome browser
AA seq
598 aa
AA seq
DB search
MAVDSAISSPLGPPACEKDAKALRFIEEMTRNADPVQERVLSDILTQNSQTEYLRRFKLN
GASDRDSFKSKLPVITYEDLQPEIQRIANGDRSAILSAHPISEFLTSSGTSAGERKLMPT
IKEELDRRQLLYSLLMPVMNLYVPGLDKGKGLYFLFVKSETRTPGGLLARPVLTSYYKSE
HFKTRPYDPYNVYTSPNEAILCPDSFQSMYTQMLRGLQDRHQVLRVGAVFASGLLRAIRF
LQLNWRQLSQDIETGTLNQKVTDPSLRECMGKILKPDPELARFVRHECSKESWEGIITRI
WPNTKYLDVIVTGAMAQYIPTLDYYSGGLPKACTMYASSECYFGLNLNPMCKPSEVSYTI
MPNMAYFEFLPHDPNSAGFTRDSPPKLVDLVDVEIGKEYELVITTYAGLCRYRVGDILRV
TGFHNSAPQFHFVRRKNVLLSIDSDKTDEAELQKAVENASRLLREFNTSVVEYTSYADTK
TIPGHYVIYWELLVKDAANSPTDDVLKQCCLAMEESMNSVYRQGRVADNSIGPLEIRVVR
NGTFEELMDYAISRGASINQYKVPRCVNFTPIMELLDSRVVSTHFSPALPHWTPERRR
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcgattccgcaatctcgtctcctttgggtccgccggcatgcgagaaagatgca
aaagctttgcgattcatcgaggaaatgactcggaacgccgacccggttcaagaacgagtt
ttgtccgatatcttaactcaaaactcccaaaccgagtaccttcgaaggttcaaactcaat
ggggcaagcgatcgtgactcgttcaaatccaaacttccggtcattacttacgaagacctt
cagcctgaaatccaacgtatcgctaatggcgaccgttccgccattttatcagctcaccca
atctcagaattcctcaccagctccgggacttcagctggtgagaggaaactgatgccaact
attaaagaagagctagatcgccgccagttgctctacagtttgctcatgccagtgatgaat
ctttatgtgccgggtttagacaaaggcaagggcttatatttcttgttcgtcaaatcggaa
acaagaaccccaggtggtctgttagctcgaccggtgctgaccagttattacaagagcgag
catttcaagacccgaccgtacgacccatacaacgtttacaccagccccaacgaagccatc
ctttgtcctgattccttccaaagcatgtatacacagatgcttcgtggtctccaagaccgc
catcaagtcctccgtgtcggcgcggtgttcgcctccggtctcctccgtgcaatcaggttc
cttcagcttaattggcgacaactctctcaggatatcgaaacgggtaccttgaatcaaaag
gtaaccgacccgtcattaagggaatgtatgggtaagatcctgaaacccgaccccgaacta
gctcggtttgtccgccatgaatgttcgaaggaaagctgggaagggattattacaaggatt
tggcctaatactaagtacctcgacgttatagtaacgggtgctatggcacagtatattccg
accttggattattacagtggtgggttacctaaggcatgtacaatgtacgcttcatcggaa
tgttattttgggttaaaccttaaccccatgtgcaaaccatcggaagtttcgtatactatc
atgccgaacatggcgtatttcgagttcttacctcatgatcctaactcagctgggttcact
cgtgactcacctcctaaactcgttgaccttgttgacgtggaaatcgggaaagaatacgag
ctcgtaatcacgacctatgccggattatgcaggtaccgagtcggcgacattttacgagtc
acggggttccataactcagccccacagttccatttcgtgaggaggaagaacgtgttgctc
agcatcgactcggacaaaaccgacgaagccgagttacaaaaagccgtcgagaacgcttct
cggctcctccgagaattcaacaccagcgtcgtcgagtacacgagttacgccgacaccaaa
accatccccggccactacgttatatactgggaattgttggtgaaagacgccgcgaactcc
cccaccgacgacgttttgaaacagtgctgtttagcaatggaagaatcgatgaactcggtg
taccgacaaggccgagttgctgacaactcaatcggcccactcgaaatccgggtggtgaga
aacggcacgtttgaagaactcatggattacgccatatcaagaggagcttccattaatcaa
tacaaggttccaaggtgtgttaacttcacacccatcatggagttactagactctagagtg
gtatctacacattttagcccagctttaccacattggacccctgaaaggcgaagatga
DBGET
integrated database retrieval system
