Gossypium hirsutum (upland cotton): 107908944
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Entry
107908944 CDS
T04793
Name
(RefSeq) cyclic nucleotide-gated ion channel 1 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
107908944
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ghi04040
]
107908944
Ion channels [BR:
ghi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
107908944
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Gene cluster
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Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
107908944
NCBI-ProteinID:
XP_016691754
UniProt:
A0A1U8JU13
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Position
D08:complement(32311555..32317987)
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AA seq
708 aa
AA seq
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MNYPPEKLVRFQDWNSGRSTEGRYSDNNWINSGKIRFTINSFSEKLQRGVESGSERFKGI
RRSFKSCSFNRGFGSSKKVLDPQGPFLQRWNKIFLLSCIIAVSIDPLFFYVPVINDDKKC
LVLDEKMEITAGVLRSFTDIFYIIHIIFQFRTGFIAPSSRVFGRGVLVEDSLAIAKRYLK
SYFVIDVLAVLPLPQVVILIIIPQMRGLKSLNTKNLLTFIVLFQYLPRVFRIYPLYKEIT
RTSGILTETAWAGAAFNLFLYMLASHVFGAFWYLFSIEREYTCWKDACRNNTKCNPRSFY
CDGDSSFSMFLNQSCPIQTPNTTLFNFGIFLNALQSGVVESENFPEKFFYCFWWGLQNLS
SLGQNLETSTYVFEICFAVFISISGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQW
MSHRLLPENLRERIRRYEQYKWQETRGVDEENLLCNLPKDLRRDIKRHLCLALLMRVPMF
EKMDEQLLDAMCDRLKPVLYTEESYIVREGDPVDEMLFIMRGKLLTMTTNGGRTGFFNSE
YIGAGDFCGEELLTWALDPHSSSNLPISTRTVRALTEVEAFALVADDLKFVASQFRRLHS
KQLRHTFRFYSQQWRTWAACFIQAAWRRYSKKKLEESLREEEDRLQDALANASGSSPSLG
ATIYASRFAANALRALRRNRSRKTRVLERVPPMLLQKPAEPDFTAEEQ
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaattatccaccagaaaagcttgtgaggttccaggactggaattcagggcgaagcact
gaaggacgttattctgataataattggataaattcggggaaaattagattcacaataaat
tccttttcagaaaagttacaaagaggggttgaatctggttctgaaaggtttaaagggatt
agaagatcatttaaatcttgttcttttaaccgtgggtttgggtctagtaagaaagttctt
gatccacaggggccgtttcttcaaaggtggaacaagatatttttattatcttgtatcata
gcagtctcaattgatcctttattcttttatgtcccagtgataaatgatgataagaagtgc
cttgttttggatgaaaagatggagatcacagccggtgtgctgcgctcattcacagatatc
ttttatataatccatattatttttcaatttcgtactgggttcattgcgccttcttctcgt
gtatttggaagaggcgttttagttgaagattcattggcaatagcaaagaggtatctgaaa
tcatactttgtaatcgatgttctagcagttcttccccttccacaggtggtgattttaatt
atcataccccaaatgagagggttgaagtcattgaatacaaagaacttgttgacatttatt
gttctcttccaatatcttccaagagtttttcgaatatatccactgtataaggaaattaca
aggacttctggcatactaactgaaactgcatgggctggagctgcgttcaatctttttctt
tacatgctagcaagccatgtttttggggctttttggtacttgttttctattgaaagggaa
tacacatgctggaaagacgcctgtaggaataatactaaatgtaacccccgttcattttac
tgtgatggtgattcttcttttagcatgtttctaaatcagtcatgcccgatacaaacaccc
aacacgactcttttcaattttgggattttcctcaatgcccttcaatctggtgttgtggag
tcagaaaattttccagagaaattcttttactgtttctggtggggcctgcagaatctaagt
tctctgggtcagaaccttgaaactagtacctatgtctttgaaatctgctttgcagttttc
atttcaatctcgggcttggttctgttttcatttctcatcggaaatatgcagacatatttg
cagtccacaactaccaggttggaggagatgagagtaaaaaggcgtgatgcagaacaatgg
atgtcccatcgcttactacctgagaatctgagggaacgaattaggcgatatgaacaatac
aaatggcaagaaactagaggagttgatgaagagaatttactttgtaatctccccaaggac
ctaagaagggatataaagcgccatctttgcttggctctgctcatgagagtgccaatgttt
gaaaaaatggatgagcaattactggatgcaatgtgtgatcgtctcaagccggttctctac
acagaggagagctatattgttcgggagggagacccagttgatgagatgctcttcatcatg
aggggcaaattgttgaccatgacaacaaatggtggaagaactggcttctttaattctgaa
tacattggggcaggggatttttgtggagaggaacttctcacctgggcactagatccccat
tcttcgtcaaatctccctatctcaactagaactgtccgagctcttacagaagttgaagct
tttgctctggtggctgatgacttgaagtttgttgcttctcaattccgccggcttcacagt
aagcagctgcgccacacttttaggttttattcacagcagtggaggacttgggcagcttgt
tttatacaagctgcttggcgccgctacagcaaaaagaaacttgaagaatctcttagagaa
gaggaggacagattgcaagacgctttagccaatgcgagtgggagttcaccaagtctgggt
gcaaccatttatgcctcacggtttgctgccaatgcactacgtgctttacggcgaaaccgt
agccgtaaaacaagagtgctggagagggttccacctatgctacttcagaagcctgcagag
cctgattttactgctgaagaacaatag
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