Gossypium hirsutum (upland cotton): 107909064
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Entry
107909064 CDS
T04793
Name
(RefSeq) protein EXPORTIN 1A isoform X1
KO
K14290
exportin-1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03008
Ribosome biogenesis in eukaryotes
ghi03013
Nucleocytoplasmic transport
ghi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107909064
03008 Ribosome biogenesis in eukaryotes
107909064
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107909064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107909064
03009 Ribosome biogenesis [BR:
ghi03009
]
107909064
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107909064
03036 Chromosome and associated proteins [BR:
ghi03036
]
107909064
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
107909064
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
107909064
Pre-60S particles
107909064
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
107909064
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
107909064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
107909064
NCBI-ProteinID:
XP_016691931
UniProt:
A0A1U8JNS8
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Position
A08:124486775..124499486
Genome browser
AA seq
1076 aa
AA seq
DB search
MAAERLKDLSQPIDVPLLDATVAAFYGTGSKEERATADQILRYLQNNPDMWLQVVHILQQ
TKSLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFRAERLYVNK
LNIILVQILKHDWPARWQSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQ
KIKELKQSLNSEFQLIHELCLYVLSASQRIELIRATLSTLHAFLSWIPLGYIFESTLLET
LLKFFPVPSSRNLTLQCLTEVASLNFGDYYNVQYVKMYNIFMVQLQTILPPTTNSPEAYA
HGSSEEQAFIQNLALFFTSFYKFHIRVLESSQENISALLMGLEYLINISYVDDTEVFKVC
LDYWNSLILELFDSHHNMDNPAVTANMMGLQVSLLPGIVDGLCAQLLQRRRLYAGTMSKL
RMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEKQM
LKKLSKQLSGEDWTWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEITKGKDN
KAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCK
RKFVIVQVGENEPFVSELLSALATTVADLEPHQIHSFYESVGHMIQAESDPHKRDEYLQR
LMALPNQKWGEIIGQARQSVDFLKDQDVIRTVLNILQTNTSVASSLGTYFLSQISLIFLD
MLNVYRMYSELISSSIAEGVPFASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQF
VPPMMDPVLGDYARNLPDARESEVLSLFATIINKYKAAMIDDVPRIFEAVFQCTLEMITK
NFEDYPEHRLKFFSLLRAIATHCFPALIQLSSQQLKLVMDSIIWAFRHTEKNIAETGLNL
LLEMLRNFQASEFCNQFYRTYFLTIEQEIFAVLTDTFHKPGFKLHVLILQQLFCLVENGL
LTEPLWDAATVPFQYPNNEMFVREYTIKLLTTSFPNMTAAEVTQLVNGLFESRNDLPTFK
NHIRDFLVQSKEFSAQDNKDLYAEEAAVQREKERQRMLSIPGLIAPNEIQDEMLDS
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgagaggcttaaggatttgagtcagccgattgatgtaccattacttgatgct
acggttgcagctttttatggcaccggatctaaagaagagagagcaactgcagatcagatc
ttacgatatctgcaaaataatccagatatgtggcttcaagttgtgcacatcctgcagcag
acaaagagcctgaataccaaattctttgccttgcaggttcttgaaggtgttatcaagtat
aggtggaatgcgttgcctgttgagcagcgagatggaatgaaaaattacatttctgaagtc
attgtccagttgtcaagtaacgaggcctccttccgagcagaaaggctgtatgtcaacaag
cttaatatcatactggttcagatcttaaagcatgattggcctgctagatggcaaagcttc
attcctgatcttgttgcagctgcgaaaactagtgaaacaatatgcgaaaattgcatggca
atactgaaacttctaagcgaagaagtttttgatttctcaagaggtgaaatgactcaacag
aaaatcaaagagcttaaacaatcgctgaacagtgagtttcaactcattcatgagttatgc
ttatacgtgctatcagcttctcagagaatagagcttatacgggctacactatccaccttg
catgcgtttctttcctggattcctctgggctatatttttgaatcaactttgttggaaact
ctcctaaagtttttccctgtgccatcatctcggaatctcacactccaatgtttaacagag
gttgcatccctaaactttggggactattataatgtgcagtatgttaagatgtacaatata
ttcatggtccagctgcagactattttgccaccaactacaaacagccctgaggcttatgca
catggaagcagtgaggaacaggcattcattcagaatttagcactgttcttcacttcattc
tacaagtttcacattcgggtgctagagtcttcacaagaaaatatttctgcgctgttaatg
ggtctggaatatcttatcaacatatcttatgtggatgacacagaggtctttaaggtttgc
ctggactattggaactccttgatcttggagctatttgactcacatcataacatggacaat
cctgctgtaactgcaaacatgatgggactgcaggtgtctttgcttcctggtattgttgat
ggcctttgtgcccagcttctgcaacgacgccgactttatgctggtacaatgtcaaagtta
agaatgcttatgatctgtcgtatggctaagcctgaggaggttctgatagttgaagatgaa
aatggcaacattgttcgagagacaatgaaagataatgatgttcttgttcaatataagatc
atgagggagactttgatctatttgtctcacctagatcacgaggatactgaaaagcagatg
ctaaagaaattgagcaagcaattgagtggtgaggattggacttggaacaatttgaacaca
ttatgttgggcaataggatccatttctggttccatgatggaagagcaggaaaataggttt
ttggtgatggtcattcgtgatttgctgaatttgtgtgaaatcactaaagggaaagacaat
aaagctgttattgctagtaacataatgtatgttgttggacagtatccaaggtttttaagg
gctcactggaagttcctgaaaactgttgtgaataagttgtttgagttcatgcatgaaaca
catcctggagttcaggatatggcctgtgacacattcttgaaaattgttcagaaatgcaag
cgaaaatttgtgattgttcaggttggagaaaatgaaccatttgtttctgaacttctgtct
gctcttgcaacaacagttgctgatctagagcctcatcagattcattccttttatgaatct
gttggtcatatgattcaagcagaatctgatccccataagagggatgaatacttgcagaga
ctgatggcacttcccaaccagaaatggggtgaaattatagggcaggcacgtcaaagtgtt
gacttccttaaagatcaggatgtgataaggactgtgctgaacatactgcagacaaatact
agtgtggccagttctcttggaacatatttcttatctcagatttctttaatattcctggat
atgctcaatgtgtacagaatgtacagtgagcttatatcaagtagtattgcagaaggtgta
ccctttgcttcaaaaacatcctatgtgaaacttctacgatctgttaagagggagactctt
aagctcattgagacatttttagataaggcagaagatcaaccgcaaattgggaaacaattt
gtgcccccaatgatggatccagttcttggtgattatgctaggaatttgccagatgctaga
gagtctgaagttttatcactttttgctacaataataaacaagtacaaagctgcaatgata
gatgatgttccccgtatatttgaagctgttttccagtgcacgctggagatgataaccaaa
aattttgaagattacccggaacatcgcctcaagttcttttcattgcttcgtgccattgct
actcattgtttccctgcacttattcagttgtcaagtcagcaactaaagctagttatggat
tcaatcatttgggcatttcggcatacagagaagaatattgcagaaactggtttaaatctt
ctattggagatgctgagaaactttcaggcttctgaattttgtaaccagttctatcgaacc
tactttttgacaattgagcaagaaatatttgccgtcttgacagacacatttcacaaacct
ggcttcaagttgcatgtcttgattttacagcagctgttctgcctggttgagaatggttta
ttgactgagcctttgtgggatgctgctacggttccatttcagtatccaaataatgaaatg
tttgttcgtgaatacacaataaaacttcttactacatcattccccaacatgactgcagct
gaggtcactcaattagtgaatggactatttgagtcaagaaatgatttgccaacatttaag
aatcacatacgggattttcttgtgcaatcaaaagaattttcagctcaggacaataaagat
ctctatgcggaagaggctgctgtacagagggaaaaagagcggcaacggatgctttcaatc
ccaggtctcatagccccaaacgaaatacaagatgagatgttggactcgtag
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