KEGG   Gossypium hirsutum (upland cotton): 107909064
Entry
107909064         CDS       T04793                                 
Name
(RefSeq) protein EXPORTIN 1A isoform X1
  KO
K14290  exportin-1
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03008  Ribosome biogenesis in eukaryotes
ghi03013  Nucleocytoplasmic transport
ghi03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107909064
   03008 Ribosome biogenesis in eukaryotes
    107909064
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    107909064
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghi03019]
    107909064
   03009 Ribosome biogenesis [BR:ghi03009]
    107909064
   03016 Transfer RNA biogenesis [BR:ghi03016]
    107909064
   03036 Chromosome and associated proteins [BR:ghi03036]
    107909064
Messenger RNA biogenesis [BR:ghi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     107909064
Ribosome biogenesis [BR:ghi03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    107909064
  Pre-60S particles
    107909064
Transfer RNA biogenesis [BR:ghi03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    107909064
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     107909064
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N mTOR_dom
Other DBs
NCBI-GeneID: 107909064
NCBI-ProteinID: XP_016691931
UniProt: A0A1U8JNS8
LinkDB
Position
A08:124486775..124499486
AA seq 1076 aa
MAAERLKDLSQPIDVPLLDATVAAFYGTGSKEERATADQILRYLQNNPDMWLQVVHILQQ
TKSLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFRAERLYVNK
LNIILVQILKHDWPARWQSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQ
KIKELKQSLNSEFQLIHELCLYVLSASQRIELIRATLSTLHAFLSWIPLGYIFESTLLET
LLKFFPVPSSRNLTLQCLTEVASLNFGDYYNVQYVKMYNIFMVQLQTILPPTTNSPEAYA
HGSSEEQAFIQNLALFFTSFYKFHIRVLESSQENISALLMGLEYLINISYVDDTEVFKVC
LDYWNSLILELFDSHHNMDNPAVTANMMGLQVSLLPGIVDGLCAQLLQRRRLYAGTMSKL
RMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEKQM
LKKLSKQLSGEDWTWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEITKGKDN
KAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCK
RKFVIVQVGENEPFVSELLSALATTVADLEPHQIHSFYESVGHMIQAESDPHKRDEYLQR
LMALPNQKWGEIIGQARQSVDFLKDQDVIRTVLNILQTNTSVASSLGTYFLSQISLIFLD
MLNVYRMYSELISSSIAEGVPFASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQF
VPPMMDPVLGDYARNLPDARESEVLSLFATIINKYKAAMIDDVPRIFEAVFQCTLEMITK
NFEDYPEHRLKFFSLLRAIATHCFPALIQLSSQQLKLVMDSIIWAFRHTEKNIAETGLNL
LLEMLRNFQASEFCNQFYRTYFLTIEQEIFAVLTDTFHKPGFKLHVLILQQLFCLVENGL
LTEPLWDAATVPFQYPNNEMFVREYTIKLLTTSFPNMTAAEVTQLVNGLFESRNDLPTFK
NHIRDFLVQSKEFSAQDNKDLYAEEAAVQREKERQRMLSIPGLIAPNEIQDEMLDS
NT seq 3231 nt   +upstreamnt  +downstreamnt
atggcggctgagaggcttaaggatttgagtcagccgattgatgtaccattacttgatgct
acggttgcagctttttatggcaccggatctaaagaagagagagcaactgcagatcagatc
ttacgatatctgcaaaataatccagatatgtggcttcaagttgtgcacatcctgcagcag
acaaagagcctgaataccaaattctttgccttgcaggttcttgaaggtgttatcaagtat
aggtggaatgcgttgcctgttgagcagcgagatggaatgaaaaattacatttctgaagtc
attgtccagttgtcaagtaacgaggcctccttccgagcagaaaggctgtatgtcaacaag
cttaatatcatactggttcagatcttaaagcatgattggcctgctagatggcaaagcttc
attcctgatcttgttgcagctgcgaaaactagtgaaacaatatgcgaaaattgcatggca
atactgaaacttctaagcgaagaagtttttgatttctcaagaggtgaaatgactcaacag
aaaatcaaagagcttaaacaatcgctgaacagtgagtttcaactcattcatgagttatgc
ttatacgtgctatcagcttctcagagaatagagcttatacgggctacactatccaccttg
catgcgtttctttcctggattcctctgggctatatttttgaatcaactttgttggaaact
ctcctaaagtttttccctgtgccatcatctcggaatctcacactccaatgtttaacagag
gttgcatccctaaactttggggactattataatgtgcagtatgttaagatgtacaatata
ttcatggtccagctgcagactattttgccaccaactacaaacagccctgaggcttatgca
catggaagcagtgaggaacaggcattcattcagaatttagcactgttcttcacttcattc
tacaagtttcacattcgggtgctagagtcttcacaagaaaatatttctgcgctgttaatg
ggtctggaatatcttatcaacatatcttatgtggatgacacagaggtctttaaggtttgc
ctggactattggaactccttgatcttggagctatttgactcacatcataacatggacaat
cctgctgtaactgcaaacatgatgggactgcaggtgtctttgcttcctggtattgttgat
ggcctttgtgcccagcttctgcaacgacgccgactttatgctggtacaatgtcaaagtta
agaatgcttatgatctgtcgtatggctaagcctgaggaggttctgatagttgaagatgaa
aatggcaacattgttcgagagacaatgaaagataatgatgttcttgttcaatataagatc
atgagggagactttgatctatttgtctcacctagatcacgaggatactgaaaagcagatg
ctaaagaaattgagcaagcaattgagtggtgaggattggacttggaacaatttgaacaca
ttatgttgggcaataggatccatttctggttccatgatggaagagcaggaaaataggttt
ttggtgatggtcattcgtgatttgctgaatttgtgtgaaatcactaaagggaaagacaat
aaagctgttattgctagtaacataatgtatgttgttggacagtatccaaggtttttaagg
gctcactggaagttcctgaaaactgttgtgaataagttgtttgagttcatgcatgaaaca
catcctggagttcaggatatggcctgtgacacattcttgaaaattgttcagaaatgcaag
cgaaaatttgtgattgttcaggttggagaaaatgaaccatttgtttctgaacttctgtct
gctcttgcaacaacagttgctgatctagagcctcatcagattcattccttttatgaatct
gttggtcatatgattcaagcagaatctgatccccataagagggatgaatacttgcagaga
ctgatggcacttcccaaccagaaatggggtgaaattatagggcaggcacgtcaaagtgtt
gacttccttaaagatcaggatgtgataaggactgtgctgaacatactgcagacaaatact
agtgtggccagttctcttggaacatatttcttatctcagatttctttaatattcctggat
atgctcaatgtgtacagaatgtacagtgagcttatatcaagtagtattgcagaaggtgta
ccctttgcttcaaaaacatcctatgtgaaacttctacgatctgttaagagggagactctt
aagctcattgagacatttttagataaggcagaagatcaaccgcaaattgggaaacaattt
gtgcccccaatgatggatccagttcttggtgattatgctaggaatttgccagatgctaga
gagtctgaagttttatcactttttgctacaataataaacaagtacaaagctgcaatgata
gatgatgttccccgtatatttgaagctgttttccagtgcacgctggagatgataaccaaa
aattttgaagattacccggaacatcgcctcaagttcttttcattgcttcgtgccattgct
actcattgtttccctgcacttattcagttgtcaagtcagcaactaaagctagttatggat
tcaatcatttgggcatttcggcatacagagaagaatattgcagaaactggtttaaatctt
ctattggagatgctgagaaactttcaggcttctgaattttgtaaccagttctatcgaacc
tactttttgacaattgagcaagaaatatttgccgtcttgacagacacatttcacaaacct
ggcttcaagttgcatgtcttgattttacagcagctgttctgcctggttgagaatggttta
ttgactgagcctttgtgggatgctgctacggttccatttcagtatccaaataatgaaatg
tttgttcgtgaatacacaataaaacttcttactacatcattccccaacatgactgcagct
gaggtcactcaattagtgaatggactatttgagtcaagaaatgatttgccaacatttaag
aatcacatacgggattttcttgtgcaatcaaaagaattttcagctcaggacaataaagat
ctctatgcggaagaggctgctgtacagagggaaaaagagcggcaacggatgctttcaatc
ccaggtctcatagccccaaacgaaatacaagatgagatgttggactcgtag

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