Gossypium hirsutum (upland cotton): 107909196
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Entry
107909196 CDS
T04793
Name
(RefSeq) transcription factor HY5
KO
K16241
transcription factor HY5
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
107909196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107909196
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
107909196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
bZIP_Maf
GAS
FmiP_Thoc5
Uso1_p115_C
DUF3563
ATF7IP_BD
XhlA
SHE3
DUF7310
Phlebovirus_NSM
TMCO5
APG6_N
TSC22
Mei4
Herpes_UL6
FlaC_arch
DUF4407
GrpE
Gal4_dimer
UPF0242
DMPK_coil
Motif
Other DBs
NCBI-GeneID:
107909196
NCBI-ProteinID:
XP_016692135
UniProt:
A0A1U8JPE9
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All DBs
Position
A08:complement(126009990..126012106)
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AA seq
169 aa
AA seq
DB search
MQEQGTSSIAASSLPSSSERSSSSALQVEVKEGMESDEEIRRVPEIGGEASAAPAAGREP
GSLTRLDRPQPSGEGGQRKRGRSPADKENKRLKRLLRNRVSAQQARERKKAYLNELETRV
RDLEKKNSELEERLSTLHNENQMLRQIVKNTTASRRGGNGSSNAADGTL
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaacaaggaacgagttcaatagcagctagttccttaccttcaagcagtgaaaga
tcttcaagctctgctcttcaagttgaagtcaaggaaggcatggaaagtgatgaagagatc
cggagagtgcctgagataggaggtgaagcatcagcagctccggccgccggtcgtgaaccc
ggttcactgacccgactggaccggcctcaaccatcgggtgaaggcggtcagagaaagaga
gggagaagcccagcggataaagaaaacaagcgcttaaagaggttgttgaggaacagagta
tcagcgcaacaagcaagggaaaggaaaaaggcgtacttgaatgaactggaaaccagagtt
agagacttggagaagaagaactctgaactagaagagaggctatccacgttgcacaatgag
aatcagatgcttcgacaaatagtcaagaacacaactgctagcaggagaggtggaaatggc
agttcaaatgcagctgatggaaccctttaa
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integrated database retrieval system