KEGG   Gossypium hirsutum (upland cotton): 107909196
Entry
107909196         CDS       T04793                                 
Name
(RefSeq) transcription factor HY5
  KO
K16241  transcription factor HY5
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    107909196
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ghi03000]
    107909196
Transcription factors [BR:ghi03000]
 Eukaryotic type
  Basic leucine zipper (bZIP)
   Plant bZIP factors
    107909196
SSDB
Motif
Pfam: bZIP_1 bZIP_2 bZIP_Maf GAS FmiP_Thoc5 Uso1_p115_C DUF3563 ATF7IP_BD XhlA SHE3 DUF7310 Phlebovirus_NSM TMCO5 APG6_N TSC22 Mei4 Herpes_UL6 FlaC_arch DUF4407 GrpE Gal4_dimer UPF0242 DMPK_coil
Other DBs
NCBI-GeneID: 107909196
NCBI-ProteinID: XP_016692135
UniProt: A0A1U8JPE9
LinkDB
Position
A08:complement(126009990..126012106)
AA seq 169 aa
MQEQGTSSIAASSLPSSSERSSSSALQVEVKEGMESDEEIRRVPEIGGEASAAPAAGREP
GSLTRLDRPQPSGEGGQRKRGRSPADKENKRLKRLLRNRVSAQQARERKKAYLNELETRV
RDLEKKNSELEERLSTLHNENQMLRQIVKNTTASRRGGNGSSNAADGTL
NT seq 510 nt   +upstreamnt  +downstreamnt
atgcaagaacaaggaacgagttcaatagcagctagttccttaccttcaagcagtgaaaga
tcttcaagctctgctcttcaagttgaagtcaaggaaggcatggaaagtgatgaagagatc
cggagagtgcctgagataggaggtgaagcatcagcagctccggccgccggtcgtgaaccc
ggttcactgacccgactggaccggcctcaaccatcgggtgaaggcggtcagagaaagaga
gggagaagcccagcggataaagaaaacaagcgcttaaagaggttgttgaggaacagagta
tcagcgcaacaagcaagggaaaggaaaaaggcgtacttgaatgaactggaaaccagagtt
agagacttggagaagaagaactctgaactagaagagaggctatccacgttgcacaatgag
aatcagatgcttcgacaaatagtcaagaacacaactgctagcaggagaggtggaaatggc
agttcaaatgcagctgatggaaccctttaa

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