Gossypium hirsutum (upland cotton): 107909215
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Entry
107909215 CDS
T04793
Name
(RefSeq) EIN3-binding F-box protein 1-like isoform X1
KO
K14515
EIN3-binding F-box protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04016
MAPK signaling pathway - plant
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
107909215
04075 Plant hormone signal transduction
107909215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107909215
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107909215
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_RPS2
F-box-like
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
107909215
NCBI-ProteinID:
XP_016692164
UniProt:
A0A1U8JV67
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Position
A08:complement(126154617..126158284)
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AA seq
636 aa
AA seq
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MPALVNYVVDDDFYSGGSFYTNSTDLGRLCSISSQVDVFYPPRKRARITAPFVVGETLFE
QSKQASIDVLPDECLFEIFKRLPGGRERSSCACVSKHWLMLLISIRKGEYESSKAVKENT
DSVSDEDDGYLTRCLEGKKATDMRLAAVAVGTTGHGGLGKLSIRGSSSSSGVTNFGLSAI
ARGCPSLKALSLWNVPRVGDEGLSEIAKECHLLEKLDLCQCPSVSNKGLIAIAENCPNLT
SLSIESCPKIGNEGLQAIGKLCPKLQAVSVKDCLLVGDHGVSSLLSSTSSLLSKVKFQGL
NITDFSLAVIGHYGKSVTNLMLSGLENVSEKGFWVMGNAQGLQKLVSLTITSCRGVTDVS
LEAMGKGCANLKQMCLRRCCFISDDGLVAFAKSAGSLESLQLEECNRITQSGTIGVLSNC
SLKSLTVVKCMGIKDISSEVPLSCCNSLKSLSVRNCPGFGTAGLAVVGRLCPQLQHVDLS
GLCGITDAGLLPLLESCEAGLVKVNLSGCLNLTDEVVLALTRLHGGTLELLNLDGCRRIT
DASLMAIAESCVFLSDLDVSRSAVTDSGVAALSRAEQLNLQVLSFSGCSRVSNKSLPSLK
KLGKTLLGLNLQHCNSISSRTFELLVETLWKCDILF
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctcttgttaattacgttgttgatgatgatttctattctgggggttctttttat
acaaattccacagatttgggtagattgtgttcaatcagttcccaagtggatgtcttctac
ccccctcgtaaaagagctcgaattactgccccgtttgttgttggagaaactttgtttgag
cagagcaagcaagcttcaatcgatgtccttcctgacgagtgccttttcgagatcttcaaa
cgacttccaggcggcagggaaaggagttcttgtgcttgtgtatcaaagcactggcttatg
cttttgatcagtattcgcaagggtgagtacgaatcctcgaaggcagtcaaggagaatact
gattcagtttctgacgaagatgatgggtatcttacgaggtgcttggaagggaagaaagca
actgacatgaggctagctgcagttgctgttggaacgactggtcatggtgggttgggaaag
ctttcaattaggggaagcagctcttcaagtggagtaaccaacttcgggctatcagccatt
gctcgtggttgcccttctctcaaggcactttctttgtggaatgtgcctcgtgttggggat
gaaggtctctctgagatagctaaagagtgccatttgttggagaagcttgacctttgccag
tgcccttcagtttcaaacaagggcttgattgcaattgcagagaactgccctaatttgacc
tctttgagcatcgagtcttgccccaagattggtaacgaaggccttcaagctatcggaaag
ctttgccctaagttgcaggctgtctccgtcaaggactgccttcttgttggggatcatgga
gtttcaagcctgttgtcgtcaacatcttctctcctttcaaaggttaaatttcagggtttg
aatatcacagacttttctcttgctgtgattggtcactatggcaagtcggtgacaaatcta
atgcttagtggcctagaaaacgtgagcgagaagggattttgggtcatggggaatgctcaa
ggcttacaaaagttggtctctttgacgatcacatcctgccggggggtaacagatgtgagt
cttgaagccatgggaaagggatgtgcaaacctgaagcagatgtgccttcgccggtgttgc
tttatttcggatgacggattggtggcttttgccaaatctgcaggttctcttgagtcctta
cagttggaggagtgcaacaggatcacccaatccgggactattggtgtcctctcaaactgt
tcgttaaaatcccttaccgtagtaaagtgcatgggaattaaggatatatcctcggaagtt
cctttgtcgtgttgcaattcccttaaatcattgtcagtaaggaactgtccagggtttggg
actgctggcctcgctgtggtgggcagattgtgccctcagcttcagcatgtagatctgagt
gggttgtgtgggatcacggacgcaggtcttctgcctcttctggagagttgtgaggccgga
ctcgtgaaggtgaatttgagcggatgcttaaatttaaccgacgaagtagttttggcctta
accaggctgcacggtggaacccttgagttgctcaatcttgatggttgcaggaggattacg
gatgcaagtttgatggcaatagcagaaagttgtgttttcctcagtgatctggatgtctca
aggtcagcagttaccgattctggtgttgctgccttgtctcgtgccgagcaactcaactta
caagtcctttctttttcgggttgttcccgagtatcaaacaaaagcttgccttccttgaaa
aaactaggcaagacactgttggggttaaatctccagcactgcaattcaatcagcagtcga
acctttgagctgctcgtcgagaccctatggaaatgtgacatccttttctaa
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