Gossypium hirsutum (upland cotton): 107909268
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Entry
107909268 CDS
T04793
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107909268
04121 Ubiquitin system [BR:
ghi04121
]
107909268
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
90S particles
Other 90S particles
107909268
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107909268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Sof1
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
ANAPC4_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
PROPPIN
Beta-prop_Vps41
eIF2A
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_IP5PC_F
VID27
LuxS
Motif
Other DBs
NCBI-GeneID:
107909268
NCBI-ProteinID:
XP_016692224
UniProt:
A0A1U8JTX9
LinkDB
All DBs
Position
D02:65109044..65114018
Genome browser
AA seq
452 aa
AA seq
DB search
MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRSQEKAVEYVRALNAAKLDKIFARPFIG
AMDGHRDSIKCMAKNPNYLKAIFSGSDDGDIRLWDLASRRTLCQFPGHQGAVQGLTVSTD
GSILVSCGSDCTVRLWNVPDANLADSDNLSDNSAKPVAVYVWKNAFRAVDHQWDGDLFAT
AGAQVDIWNHNRSQPVNTFDWGADTTISVRFNPGEPNILATSANDRSITLYDLRMSSPAR
KVIMRTKTNSIAWNPMEPMNFTAANEDCNCYSYDARKLEEAKCVHKDHVSAVMDIDFSPT
GREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFCVKYSCDASYVISGSDDTNLRLWK
AKASEQLGVVLPRERKKHEYLEAVKNRYKHLPEVKRIVRHRHLPRPVYKAANLRRTMIEA
ERRKEQRRKAHSAPGSIVTEPVRKRRIIKEVE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaaagtaatatcacgttctacagatgagttcactcgagaacgaagccaagat
ctgcagagggtgtttcgtaatttcgaccccagcttacgatcccaagagaaagccgtcgag
tacgtccgagctcttaacgctgccaaattggacaagatatttgcaaggccctttattgga
gctatggatgggcatagagattccattaagtgtatggcaaagaacccaaattacttgaaa
gcaattttttctggttctgacgacggagatatccgactttgggatttagcttccaggcga
acactttgtcaatttcctggtcaccaaggtgctgtacaaggtttgacagtatcaacagat
ggaagcattcttgtatcatgtggcagtgattgcactgttaggctctggaatgttcctgat
gctaatcttgcagattcagataatctttccgataattcagctaagccagtagcagtttat
gtttggaagaatgcattccgggctgttgatcaccaatgggatggtgatctctttgccaca
gctggtgctcaagtagatatatggaatcacaataggtctcagccagtgaacacttttgat
tggggagcagacacaactatatctgttcgatttaatccaggagagccaaatatcttggca
acatcagctaatgatcggagcataacattgtatgatctgcggatgtcatccccggcaagg
aaagttattatgaggacgaaaaccaattctattgcttggaacccaatggagcctatgaac
ttcaccgcggcaaatgaggattgcaattgctacagctatgatgccagaaagctggaggag
gccaagtgtgtgcacaaagatcatgtttctgcagtaatggatattgatttctcaccaact
ggtcgggaatttgtaactggatcttatgatagaacagtcagaattttccagtataatggt
ggtcacagtcgagaaatctaccatacgaagagaatgcaaagggtattctgtgtgaagtat
agctgtgatgccagttatgtcatttcgggaagtgatgatactaaccttaggctctggaaa
gctaaagcatcagaacaattgggagtggtacttccaagggaaagaaagaaacatgagtat
cttgaagctgttaagaatcgttacaagcatctgcctgaagttaagcgtattgtgaggcac
aggcacttgccaagaccagtttacaaggcagccaacctcagacgcactatgattgaagca
gaaagaaggaaagaacaaagaaggaaagctcacagtgcccctggaagcattgtgactgaa
ccagttcgtaaaagaagaataatcaaagaggttgagtga
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