Gossypium hirsutum (upland cotton): 107909279
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Entry
107909279 CDS
T04793
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase FLY2 isoform X1
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107909279
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107909279
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107909279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-RING_5
zf-C3HC4_3
zf-C3HC4
DUF2921
PHD_NSD
zf-ANAPC11
zf-RING_UBOX
zf_RING_Vps8
zf-RING_16
Prok-RING_4
zf-P11
Motif
Other DBs
NCBI-GeneID:
107909279
NCBI-ProteinID:
XP_016692241
UniProt:
A0A1U8JPN0
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All DBs
Position
D02:complement(65258942..65267094)
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AA seq
577 aa
AA seq
DB search
MGCRGFDMITREYLDFLWNSRRRRLGFVFRVVFGLWFGFVMLKPVAGLRPIRERARSWGD
EWLFVRKDESELGPFHAWNITGTYRGSWKFLESLNSSSKFPDFRKSAGDSVIELVSTPTK
ITGVHYVQGVIIFHDVFDNKHNVGGAQIRVEGVYIWPFRQLRMVANSGKEGELSQEEDYI
LSNPYHLLGVFSSQVFQESPRDKIWRRKNSPIYEMEKRCNIEIAAQISRISSSQNDGDHD
RYHIEGLMESPTVDDDGDCFSPLLLNATSVNIEVYYNKAVNYTLMVTFVSFLQVLLLIRQ
MEHSNTQSGAAKVSILTIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIF
EMRYLLAIWKASRPMNNGEGWETMRRELSVLYSRFYGILLGGILVMYEFHNFLQPILLLL
YSFWIPQIITNVIRDSRKPLHPHYILGMTITRLAIPLYIFGCPHNFMRIEPDKSWCICLV
VFIGLQASILLLQHYLGSRWFIPRQILPEKYSYYRRFDPEANHAIDCVICMTSIDLTQRS
RDCMVTPCDHFFHSGCLQRWMDIKMECPTCRRSLPTA
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgggatgtcggggttttgatatgatcaccagggaatatttggattttttgtggaattcg
aggaggagaagattagggtttgtgtttagggttgtttttggattgtggtttggttttgtt
atgttaaagccagtggcgggattgagaccgataagagaaagggctcggtcatggggcgat
gagtggctatttgttagaaaagatgaaagcgaattgggtccatttcatgcatggaacata
acaggaacttatcgaggctcttggaagttcctggagtctttgaatagctcttcaaaattt
cccgatttcaggaaatcagctggtgattctgtcattgaattagttagcacaccaacaaaa
ataaccggtgtacattatgttcagggtgtaattattttccatgatgtgtttgataacaaa
cacaatgttggtggtgctcaaataagggtagagggtgtatatatatggccttttagacag
cttcgaatggtagctaacagtggaaaggaaggtgagctgagtcaggaagaagattatatt
ttgtctaacccataccatttgcttggagttttctcctctcaagtgttccaagaatctcca
cgtgacaaaatatggagaagaaaaaattcaccaatttatgagatggagaaacgttgcaat
atagaaattgcagcccaaatttcacgcatctcatccagccaaaatgatggagatcatgat
cgttatcacatcgaaggattgatggagagtcccacggtggatgatgatggagattgcttc
tcacctttgctattaaatgcaacttctgtcaacattgaagtctattacaacaaagcagtc
aactacaccttaatggtcacctttgtctccttccttcaagtccttctgttaatcagacaa
atggaacatagcaacacacaatcgggagctgcaaaagtttcaattttaacgattggtcaa
caggctatcatggatgcttatctttgcctcttacatctcactgcaggaatactggttgag
tccttgtttaatgcttttgcaactgcggcattcttcaagtttgtagttttctccattttt
gagatgaggtaccttcttgcaatatggaaggcaagtagaccgatgaataacggtgaaggt
tgggagacaatgaggcgtgagctatcagttctatacagccgtttctatgggatcctttta
ggaggcattttggtcatgtacgagtttcataattttttgcagcctatacttctccttttg
tactcattttggatacctcaaataatcaccaatgtcattcgtgattcaagaaaacctttg
catcctcattacatcttaggcatgactattactcggctagcaatcccattatatatattt
ggatgccctcacaactttatgcgaattgagcctgacaagagctggtgcatctgtttggtt
gtattcattggacttcaagcatccattcttcttcttcagcactatcttggatctcgatgg
tttattcctcgtcagatactacccgagaaatatagctactatagaagatttgatccagaa
gcaaatcatgccatagactgtgtcatttgtatgacttccattgatctcacacaacgttca
agagattgcatggtaacaccatgtgatcatttctttcattcgggttgtttgcaaagatgg
atggacataaagatggaatgcccaacttgccgccggtcgttaccaacagcttaa
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