Gossypium hirsutum (upland cotton): 107909380
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Entry
107909380 CDS
T04793
Name
(RefSeq) zinc finger protein GAI-ASSOCIATED FACTOR 1
KO
K25869
zinc finger protein IDD1/2
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107909380
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107909380
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
107909380
NCBI-ProteinID:
XP_016692357
UniProt:
A0A1U8JQ12
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Position
D03:complement(1225633..1228706)
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AA seq
550 aa
AA seq
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MPVEVDNSSTVSGNASVSSTGNRNPPPKSTVKKKRNLPGMPDPDAEVIALSPTTLLATNR
FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEVKKKVYVCPEPTCVHHDPSRALGD
LTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTVFSRRDSFVT
HRAFCDALAVESAKTQTNPSSEPDPKVQAADSLPPPASPPVSAPSAVTSSDMPIQSSVLA
EVPSIVVEKAPAPAPAPAPAMALAPAPPPASLNGSCSTSVSLISSGCSSSGGVFSSLFTS
STVSASIRPPQPPAPAPPSAGLNGSCSGSISLVSSGASNSSSSGVFASLFASSTVSASIR
PPQPPALTNLIRADLAPSTSIEPISLCLSTSHGSSIFGTAGQEHRQHVPSLQPAMSATAL
LQKAAQMGAAASNASLLRGLGIVSSSAPQENLQWGQAQVDPDNASIAAGVGLGLPCDGSS
GLKELMMGTSVFGPKQTTLDFLGLGVAAGGNPNAGLSALITSIGGGFDAATAAASFRGGD
YTDKDIGRSS
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgccggttgaggttgacaattcctccaccgtctccggcaacgccagcgtctcttccacc
ggtaaccgaaacccacctcccaaatccaccgttaagaagaaacgtaacctccctggaatg
ccggatccagatgcagaggtgattgctttatcacctacgactttgttagctacgaaccga
ttcgtgtgtgaaatttgtaacaaagggtttcaaagggaccaaaatcttcagcttcataga
cgaggtcataatctgccatggaagctgaggcaaagatcgagcaaggaagtgaagaagaag
gtttatgtttgtcctgagccgacgtgtgttcatcatgacccttcgagagctttaggtgat
ctcacggggattaagaagcatttctgtagaaaacatggtgaaaagaaatggaaatgtgat
aaatgttctaagaagtacgctgttcaatcggattggaaagctcactctaagatctgtggc
actcgagagtataaatgtgattgtggaactgtgttttccaggagggacagttttgttacc
cacagagctttttgtgatgcgttagcagtggagagtgctaaaacacaaacgaatcccagt
tcggaacccgacccaaaagttcaggcggcggattcattgccaccgcctgcatctccgcca
gtgtctgctccgagtgcagtaacttcttcagatatgccgattcaaagttctgtgttggct
gaagttccaagtattgtcgtggaaaaagctccagctccagcaccagcaccagcaccagct
atggcactggcaccggctccacctccggctagcttaaatggaagttgtagcactagtgtc
agcttgattagcagtggttgtagcagcagcggcggtgtattttcgagcttatttacgtcc
tcgactgtatctgcaagcattcgacctcctcaacctccggcaccagctccaccatcggct
ggcttaaatggaagttgtagcggtagcatcagcctggttagcagtggtgctagcaatagc
agcagcagtggtgtatttgcaagcttatttgcctcctcaactgtatctgcaagcatacga
cctcctcaacctcctgctttaaccaatttaattcgagctgaccttgctccatctacatca
atcgaaccaatttctctatgcctctcgaccagccatggctcgtcaatattcgggactgca
gggcaagagcatcggcagcatgtaccgtcgctgcaacctgctatgtcagccactgcacta
cttcagaaagctgctcagatgggagcagcagcaagtaatgcatccttgcttcgtggtctc
ggtatcgtttcgtcatcagcaccacaagaaaatttacaatggggtcaggcacaagtggac
cctgacaatgcctccattgcagcaggggttggactagggcttccctgtgatggaagttct
ggattaaaggaactgatgatgggaacctcagtgttcggtcctaagcaaactactctcgat
ttccttggattgggggtagctgccggtggcaaccccaatgccggcctgtcagctctaatt
acctctatcggaggaggatttgatgctgccacggcggcagcatcatttcgaggtggagat
tacaccgacaaggacattggaagaagctcgtga
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