Gossypium hirsutum (upland cotton): 107909427
Help
Entry
107909427 CDS
T04793
Name
(RefSeq) probable ubiquitin-conjugating enzyme E2 16
KO
K10688
ubiquitin-conjugating enzyme E2 W [EC:
2.3.2.23
2.3.2.25
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107909427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107909427
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.23 E2 ubiquitin-conjugating enzyme
107909427
2.3.2.25 N-terminal E2 ubiquitin-conjugating enzyme
107909427
Ubiquitin system [BR:
ghi04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
107909427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UQ_con
RWD
UFC1
Prok-E2_E
Motif
Other DBs
NCBI-GeneID:
107909427
NCBI-ProteinID:
XP_016692419
UniProt:
A0A1U8MD24
LinkDB
All DBs
Position
D03:893065..895598
Genome browser
AA seq
161 aa
AA seq
DB search
MSSSSASSRKALSKIACNRLQKELVEWQSNPPSGFKHKVTDNLQRWVIEVNGAPGTLYAN
ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
LSMLSSATAKQCPEDNDRYVKNCRNGRSPKQTRWWFHDDKV
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctcatctgcatcctctcgcaaggcgctgagtaaaattgcctgtaatcggctg
caaaaagagcttgtagaatggcagtccaaccctccttctggattcaaacataaagtcaca
gataatcttcaaagatgggtaattgaagtgaatggagctccgggtactttatatgccaat
gaaacttaccagcttcaagttgatttccctgaacattaccccatggaagcaccccaggtt
atatttcttcatccagcacctctccatccacatatttatagcaatggacatatttgttta
gatatattgtatgattcatggtcacctgctatgactgttagttctatctgtatcagcatt
ctctccatgctatcaagcgcgactgccaagcaatgtcccgaagacaacgacaggtatgta
aagaactgtcggaacggccgatctccgaagcagacacggtggtggttccatgatgataaa
gtttaa
DBGET
integrated database retrieval system
