Gossypium hirsutum (upland cotton): 107909459
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Entry
107909459 CDS
T04793
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 1-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107909459
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107909459
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107909459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_11
zf-RING_2
zf-RING_UBOX
HemY_N
Motif
Other DBs
NCBI-GeneID:
107909459
NCBI-ProteinID:
XP_016692465
UniProt:
A0A1U8JQE1
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All DBs
Position
D03:complement(619852..622018)
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AA seq
303 aa
AA seq
DB search
MREALFGIFSLLFIAYFSELASSNIVFKPLSISLPDLPAKFAIGNNTGVCGALEVADPLD
ACSPLRNDFGSNQSDSIRFALIIRGDCSFEEKIRNAQNKGFSAAIVYDDKYSNNLVYMMV
NPKGIKVLAVFVSKSAGEFLKDHAKGENGECCIYPPLNGKAWTVFAICFLSLVVIAAFLV
IAFVAPRSLSNWRRRNLVRRVDSKVVEALPCFVFGSARSSIAGETCAICLEDYNDGELLK
VLPCQHVCRFLLAMAIPIRSVFLHPLSLQNHAQNIWETLMQPSGHCIRCHLSGIKLIRWH
CGV
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgagagaagctttgtttgggattttttcattgttatttattgcttatttcagtgaatta
gcttcatctaacattgtttttaagcccttatcaatttccttgccggaccttcccgccaaa
ttcgctattgggaataacacgggcgtttgtggtgctcttgaagtggcggatccattggat
gcttgtagtccgctccgaaacgatttcggatctaaccaaagtgattctataagatttgct
ttgataattagaggggattgttctttcgaggagaaaatccgaaacgctcaaaataagggt
ttttctgctgcaattgtttacgatgataaatatagtaacaatttagtatacatgatggtg
aaccctaaaggaatcaaagtgctagctgtttttgtgtctaaatctgctggtgaattttta
aaagatcatgctaaaggtgaaaatggggaatgctgtatttacccaccattgaatgggaaa
gcatggactgtttttgctatttgtttcctatcacttgttgttatagcagctttcttggtg
attgcctttgttgctcctcgaagcttgtcgaattggcgacgaaggaatttagtgagacgt
gttgatagtaaagtggttgaagctcttccttgttttgtgtttggttcggctcgttcgagt
attgccggtgaaacttgtgcgatttgcctcgaggattataatgatggggagcttcttaaa
gtgcttccttgtcaacatgtgtgccgctttctccttgcaatggccatccctatcagaagt
gtgtttctgcaccctttgtctcttcaaaatcatgcacaaaacatttgggaaacgctgatg
cagccgtctggccattgtattcgttgccatctctccggcatcaaattgatccgctggcat
tgtggtgtataa
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