Gossypium hirsutum (upland cotton): 107909506
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Entry
107909506 CDS
T04793
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.17
KO
K14487
auxin responsive GH3 gene family
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107909506
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Motif
Pfam:
GH3
GH3_C
GH3_M
Glyco_hydro_77
Motif
Other DBs
NCBI-GeneID:
107909506
NCBI-ProteinID:
XP_016692535
UniProt:
A0A1U8JQM0
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Position
D02:complement(64791333..64794130)
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AA seq
644 aa
AA seq
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MRACPTSCTAVKQQFSTCSRKPKDVNQMTRGNPCQLPGMLPNYDPNDSEAGMKILEDLTE
NVEQIQQRVLEEIITRNARTDYLKGFLDGEFDKQVFKKTVPVVNYEDIKPYIERIANGDS
SNIISAEPIIELLTSSGTSGGQPKMMPSTAEDLHRKTFFYNLLVPVMNKYVDGLDEGKAM
YLLFVKPETKTPSGLMARPVLTSYYKSNNFKNRPFNRFNVYTSPDETILCSDSKQSMYCQ
LLCGLVQRQEVLRVGAVFASAFLRAIKFLEHNWKELCSNIRTGHVSDWITDPGCRKVVSL
VLNKPKPELADLIEHECNSKSWEGIIKKLWPRTKYIEVIVTGSMAQYVSTLEYYSGGLPL
VSTMYASSECYFGINFKPLSKPWDVSYTLIPNMAYFEFLPVKKKNEDGAQYVQCNGVCKE
NCMEKETEKEDVETVELVDVKLGQYYELVVTTFTGLYRYRVGDILMVTGFHNKAPQFRFV
HRRNVVLSVDTDKTSEEDLLKAVTKAKVIVESLGILLIEYTSYADTSSIPGHYVLFWEIT
SKGNNHLPVLDHKIMEQCCSTVEESLDSVYRRCRRKDNSIGPLEIRVVQHGTFDALMDFC
VSQGSSVNQYKTPRCIKSGEAINILDSRVVARFFSQKAPFWEPV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgagagcatgccccacaagttgtacagcggtcaaacagcagttcagcacatgctctaga
aaacccaaagacgttaatcaaatgacaagaggtaatccttgccagttgccagggatgttg
ccgaattatgatcctaacgatagtgaagctggcatgaagatactggaggaccttacggaa
aatgttgaacaaatacagcagcgggtattagaggagataataacacgaaatgcgcgtacg
gattatcttaaaggcttcctggatggagagtttgacaagcaagttttcaaaaagacagtt
ccagtggtgaattacgaagatatcaaaccttatattgagcgaattgccaatggggattca
tcaaacatcatttctgctgaaccaatcattgagttgctcacaagctccggcacttcgggt
gggcagccaaagatgatgccttcaactgctgaagacttgcacagaaagacattcttttat
aatctgcttgtgccagtgatgaacaagtatgtagacggcttggacgaaggaaaagcaatg
tatcttttgtttgttaagccggagactaaaactccctccggtctaatggcgaggcctgtc
ttaacaagctactataagagtaataatttcaagaatcgacccttcaaccgcttcaatgtt
tacactagtcctgatgagaccatcttgtgctctgacagcaagcagagcatgtactgtcaa
ttactttgcggtttagtacaacgacaagaggttttaagagttggtgcagtttttgcttct
gctttcctacgggccatcaagttcttggaacataattggaaagagctctgctccaacatt
agaacgggtcatgtcagtgattggatcactgaccccggttgcagaaaagtagtatcacta
gttctcaacaaacccaaaccggagttagccgacttgatcgaacatgaatgcaatagtaaa
tcctgggaagggataattaagaaactctggcctagaacaaaatacattgaagttattgtt
acaggttccatggcacaatatgtatctactcttgaatactacagtggtgggctacctttg
gtttccacaatgtatgcttcttcagaatgttactttgggatcaatttcaaaccactgagc
aagccttgggatgtctcttacacccttatcccgaatatggcttacttcgagttcttacct
gtgaagaaaaaaaacgaagatggagctcaatatgtccaatgcaatggtgtttgcaaagaa
aattgcatggaaaaagagaccgaaaaggaagatgttgaaactgttgagctcgtggatgtt
aagcttggccagtattatgaactcgttgtcacaacttttacaggcctgtatagatataga
gttggagacattctaatggtaactggattccacaataaagctcctcaatttcgattcgtg
catcggaggaatgtcgttttaagcgttgacacagacaaaaccagtgaggaagacctgtta
aaggcagtgacaaaagcaaaggtcattgttgagtcgcttggtatcctcttgatcgagtac
actagctatgccgacacttcctctataccaggccattatgtgctattctgggagatcaca
agcaaagggaataatcatcttccagtacttgatcataagataatggagcagtgttgctcc
acggtggaagaatctcttgattctgtttatagaagatgtcggagaaaggacaattcaatt
ggaccattggagataagagtggtgcaacatggaacatttgatgcactcatggatttctgt
gtgtctcaaggatcttctgttaaccaatacaagacaccaagatgcatcaaatctggggag
gccattaacatattagattctagggtggtagcaaggtttttcagccaaaaggcacctttt
tgggagcctgtttag
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