Gossypium hirsutum (upland cotton): 107909833
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Entry
107909833 CDS
T04793
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107909833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107909833
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107909833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Motif
Other DBs
NCBI-GeneID:
107909833
NCBI-ProteinID:
XP_016692999
UniProt:
A0A1U8JXJ0
LinkDB
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Position
D02:57279171..57284254
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AA seq
424 aa
AA seq
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MFGAQASTSAFGTPSSTPAFGTPSSTPAFGTTPSTPAFGAPSSTPAFGTPSSTPAFVTPS
STPAFGAPSSTPAFGAPSSTPAFGTPSSTPAFGTPSTPSFATGFGGSSLFSTPFSSQTQQ
QQTSLFQQPQPSIAAPSSGFGFQTSLSATPFPNAQLTTQMAPVAPLPFSLADRDIQAIVD
AYKEEAGNPKYAFKHLLFSVIEPQFRGKPAGVSDIMWAEAMAKLEGMESSDRERLWPQLV
QGFKDLSQRLKLQDEVIVSDAERLRMTQSNVKMLQRHFQAETLPWIQRMRQKEQSLQRRL
LKMMRILEALEGKGCRVPLMKGEVELAEKLAAITRQLKGSGAELSRRVQNLLTVSRVQAN
AIGAGGSLYLPGSTKIHEQSLADMQEVLQQQTEAIARLGNVLKRDIRDMEIIMAEDTDMT
ENVN
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgttcggagctcaagcttccacttctgccttcggcactccttcttccacccctgccttt
ggcactccttcttccaccccggcctttggaactactccttccactccggcttttggggct
ccttcttccacaccggcatttggcactccgtcttcgacaccggcgtttgtcactccttct
tcgacacctgcgtttggggctccgtcttcgacacctgcgtttggggctccgtcttcgaca
ccggcgtttggaactccgtcctcgacaccggcttttggaactccatcaacgccgtctttc
gctacgggctttggcggctcctctcttttctccaccccattctcttctcaaacgcaacag
caacagacttcattgtttcagcaaccacagccatccatcgcggcaccctctagtggtttc
ggattccagacttcgttatccgccactcctttccccaatgctcaattgacaactcaaatg
gctccggtggcccctctccccttctctcttgccgatcgtgacattcaagcgattgtggat
gcttacaaagaggaggctgggaaccctaagtatgctttcaagcatttgttgtttagtgta
attgaaccacagttcaggggaaagccagctggtgtatcagatataatgtgggcagaagct
atggcgaaactggagggtatggagagttctgatcgggaaagactctggcctcagcttgtt
cagggttttaaggatctttcacagcggttgaagctacaagatgaagtcattgtttcagat
gctgagaggttgcgaatgacccagagcaatgtgaaaatgcttcaaaggcattttcaagct
gaaactcttccatggatccagagaatgagacaaaaggagcaaagcctccaaagacggctc
ttaaagatgatgagaatactggaagcattagaaggtaagggttgccgtgtgcctttaatg
aaaggggaagttgaattggctgagaagttggctgcaataactagacagttgaaaggatct
ggagccgaactttctaggagggttcaaaacctgctaaccgtatctcgtgttcaagcaaat
gctattggtgctggaggttctctttatcttccaggatcaactaaaatacatgagcagagt
cttgccgatatgcaggaggtattacaacagcaaacagaggccattgcaaggcttggcaac
gttttgaagcgagatatcagggatatggagataataatggctgaagacacggatatgacg
gaaaatgtgaattag
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