Gossypium hirsutum (upland cotton): 107909934
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Entry
107909934 CDS
T04793
Name
(RefSeq) protein CHROMATIN REMODELING 19-like isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107909934
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107909934
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
VGPC1_C
Motif
Other DBs
NCBI-GeneID:
107909934
NCBI-ProteinID:
XP_016693132
UniProt:
A0A1U8JS76
LinkDB
All DBs
Position
D02:51475884..51482816
Genome browser
AA seq
750 aa
AA seq
DB search
MKRVFEEISDEEWENHSFKPSRVLKKNPNPPPIESFAFNSQTQASFSDQSSDDCVEIEHL
ADDSNLEDDVEPEDAGPVNLARRFIVDEDDDDEEDGDGKDGNENAFEELYDIESSEEEQL
QEDDVVGKALQKCAKISAELRKELYGSSGASCERYAEVEASSVRIVTQNDIDAACAVVDP
EFQPVLKPYQLVGVNFLLLLHSKGIGGGDGCSFFFMMPCTMLIAILADEMGLGKTIQAIT
YLTLLKHLKNDPGPHLIVCPASLLENWERELKKWCPSFSVLQYHGAGRASYSKELGYLSK
AGLPPPFNVLLACYSLFERHSVQQKDDRKILKRWKWSCVLMDEAHALKDKNSYRWKNLMS
VARNAKQRLMLTGTPLQNDLHELWSLLEFMMPDLFATEYVDLKKLLNAEDRELIGRMKSI
LGPFILRRLKSDVMQQLVPKIQQVEYVIMEKHQENAYREAIEEYRTISRARIAKLSEPDL
NNIIGIIPRRQISNYFVQFRKIANHPLLVRRIYDDDDVGRFAKRLHSIGVFECTLDRVVE
ELKNYSDFSIHQLLLRYGITGGKGTLSDEHVMLSAKCQALAELLPSLKRSGHRVLIFSQW
TSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTIVDDFNNDTSIFACLLSTRAGGQGLNLT
GADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLTLDA
AVLESGLDVGNEDDTSEKTMGQILSSLLMS
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgttttcgaggaaatctctgacgaagaatgggagaaccactctttcaagcct
tctcgtgttttgaagaaaaaccctaatcctcctccaattgagtctttcgctttcaattcc
caaactcaggctagtttttccgaccaaagcagcgatgattgtgtcgaaatcgaacatttg
gctgatgattccaacttggaagacgacgttgagcccgaggatgccgggccggtcaacctt
gcgcgtcgattcatcgttgatgaagacgatgacgacgaagaagatggtgatggaaaagac
ggcaatgagaatgcttttgaggagctgtatgacattgagtcgagtgaagaagagcaattg
caagaggatgacgtggtggggaaggcgttgcagaagtgtgcgaaaatatctgcggagcta
cggaaggagctgtatgggagttccggtgcttcttgcgaacgatacgccgaagtagaagct
tcttcagtgagaatcgttacacagaatgatattgatgcagcatgtgcagtggtggatccg
gaatttcagccagttctcaagccatatcaactggttggtgtaaattttcttcttctgttg
catagtaagggcattggtggaggggatggttgttcatttttctttatgatgccatgtact
atgttaatagctatattggcagatgagatgggtcttgggaaaaccattcaggctattaca
tatctgactttgctgaaacatctgaaaaatgatcctggtcctcatttaatagtttgtcct
gcctcacttttggaaaactgggaaagagaacttaagaagtggtgcccctcattttctgta
cttcagtatcatggtgctggccgagcatcttattcaaaagagttgggttatttgtccaaa
gctggattgccacctccatttaatgttcttcttgcgtgttattcactttttgaaagacac
agtgtgcagcagaaggatgaccgtaaaattctgaaacgatggaaatggagctgcgtgcta
atggatgaggcccatgctttgaaggacaagaacagctacaggtggaaaaatctaatgtca
gttgctcgaaatgcaaagcagcgtcttatgctaacaggcacaccactgcaaaatgattta
catgagctgtggtctttgctagagttcatgatgcccgacctttttgccactgagtatgta
gatctgaagaagctactaaatgcagaagatagggagctaattggtcgtatgaagtccatc
ttgggaccattcatcttgaggcgtttgaaatcagatgtgatgcagcagcttgtcccaaag
atacagcaggttgagtatgtgattatggaaaagcatcaagaaaatgcttatagggaagct
atagaagagtatcgtacaatttcacgagcacgcattgcaaagttatcagaaccggacttg
aataatatcattgggattattcctcggcgtcagatctctaactattttgttcagtttcgc
aagattgcaaatcatccattattagtgaggcgaatatatgatgatgatgatgttggtcgc
ttcgctaaaaggttacattctattggtgtttttgaatgtaccttggacagagtagttgag
gaattaaagaattacagtgacttctccattcatcagcttttacttcgttatggaattact
ggtggtaaaggaactctttctgatgaacatgttatgctttctgctaaatgccaggcatta
gcagagcttctcccttcactcaagagaagtgggcaccgtgttctgatttttagccagtgg
acatcaatgcttgatatcttagagtggactttagatgtgattggggttacatatagacgg
cttgatggaagcactcaggtgaccgataggcagactatagttgacgatttcaataatgac
acttctatatttgcgtgcttgttgtccacgagagctggagggcaaggtttgaacttaaca
ggagctgatactgtagttattcatgacatggattttaatccacagatagatcgacaggct
gaagatcgctgccatcgaattggccaaacaaggccagttaccatatacaggctagttacg
aaaggtacagttgatgagaatgtttatgagattgcaaaaaggaagttgactcttgatgca
gcggtgctagagtctggattggatgtaggcaatgaagatgacacatctgagaaaacaatg
gggcagatattatcatccctactgatgagctag
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