Gossypium hirsutum (upland cotton): 107909938
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Entry
107909938 CDS
T04793
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107909938
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107909938
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
107909938
NCBI-ProteinID:
XP_016693137
UniProt:
A0A1U8JWJ8
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Position
D02:complement(51231545..51235461)
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AA seq
589 aa
AA seq
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MAAASSSTPFFGTREENQNQMMQVQSSTATPTSSTAPTTAPQKRKRNHPGTSSDPDAEVI
ALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLRQKTTKEVKRKVYLCPEPT
CVHHDPSKALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDC
GTLFSRRDSFITHRAFCDALAQESARHPTNLSTMGSHHLFGGNHHMSLGLSHVGSQIPPL
QDQNQVQPSSNLLRLGSTSGAVKFDHLISPSNPSSLQNMPSSMFFMAEAANQGFHQDHQS
HHGHGLYPNKPLHGLMQLPDLQGSTNNSPTSSNFFNLGFFSNTSATSSISTSEIGGGQGP
ALFPSNMGDQVGSGMSSLYTTSMQHENISPHMSATALLQKAAQIGSTTSNNTTSTLLRGL
GSSLSGGTKSDRPVFSPNFGSNFEGGNGSETLRSHMEDDSNLQGLMNSLAANGNSSIFDG
GPSHGQDNNFGGFNGSGLTLEPQSSNANFCNVNEAKLHQNLAAGIGGTDKLTLDFLGVGG
MVGNISGGFSQREQHGINISSLEPDMKSSVQPNTEHFGHAKLAKAPRQA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcctcatcgtccacacctttttttggaaccagggaagaaaatcaaaaccag
atgatgcaagtacaatcatccaccgctacacccacttcgtcaactgctccaaccactgca
cctcagaagagaaagagaaatcaccctggaacatcatcagatccagatgcggaagtgata
gcactatctcccaagactctaatggcaacaaacaggttcatttgtgaggtatgcaacaaa
gggttccaaagggagcaaaatttacagctccacagaagaggacacaatctgccttggaag
ctaagacaaaagacaacaaaagaagtgaagaggaaagtttatctttgcccagaacccaca
tgcgtccaccatgacccttctaaggcacttggcgacctcactggcatcaaaaagcattac
tcaagaaaacatggtgagaagaaatggaagtgtgagaagtgttccaagaggtatgccgtg
caatcggattggaaagctcattcaaagacttgcggcactagagagtacagatgtgattgt
ggcactcttttctcaagacgtgatagttttattactcaccgggccttttgcgatgcactg
gctcaagagagtgctagacaccccaccaacttaagcacaatgggcagtcatcacctcttt
ggaggtaatcatcacatgagtttagggttatcccatgttggttctcaaattccgccactg
caagaccagaatcaagttcaaccgtcgagtaatctgttgaggttgggaagtacatctgga
gcggtaaagttcgatcaccttatttctccatcaaacccttcttcattacagaacatgcca
tcgtctatgttcttcatggcagaggcagcaaaccaaggctttcatcaagaccatcaatct
caccatgggcacggattatatcccaacaaaccattgcatgggcttatgcaacttcctgac
cttcaaggaagtactaacaattcccccacttcatccaattttttcaatttaggcttcttt
tccaataccagtgctacaagcagcataagtaccagtgaaataggtggcggtcaagggccc
gcattgttcccttctaacatgggagatcaggttggttcaggaatgtcctctctttatacc
acttccatgcaacatgagaacatctctccacatatgtcggccactgcattgcttcaaaaa
gctgctcaaataggttcaactacaagcaacaacactacttccactttgctaaggggatta
ggaagctcattatcaggtgggactaaatccgacagacctgttttctcccctaacttcggc
agtaatttcgagggtggcaatggaagtgaaaccctacgatcacatatggaggatgatagc
aatctgcaaggattaatgaactcacttgcagcaaatggtaactcttccattttcgacggc
ggcccaagccatgggcaagataacaacttcggagggttcaatggaagtgggttgacacta
gaaccgcaaagcagtaatgctaacttttgcaacgttaacgaggcaaagttgcatcaaaat
ctcgccgcaggcataggcgggactgataaattgaccttggattttctaggcgttggagga
atggttggaaacattagtggtggtttttcgcagagagaacaacatgggatcaacattagc
tccttggaacctgacatgaaatcatcagttcaaccaaatactgaacactttggtcatgca
aaacttgccaaagcgcctaggcaagcgtag
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