Gossypium hirsutum (upland cotton): 107910182
Help
Entry
107910182 CDS
T04793
Name
(RefSeq) protein transport protein SEC23
KO
K14006
protein transport protein SEC23
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107910182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107910182
Membrane trafficking [BR:
ghi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
107910182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
Gelsolin
zf-Sec23_Sec24
Vps36-NZF-N
DDE_Tnp_ISL3
Motif
Other DBs
NCBI-GeneID:
107910182
NCBI-ProteinID:
XP_016693450
UniProt:
A0A1U8JT77
LinkDB
All DBs
Position
D02:37109473..37118701
Genome browser
AA seq
769 aa
AA seq
DB search
MANSDPEGVDGVRMTWNVWPRTKLEASKCVIPLAASIAPIPPHSDIPTLPYAPLRCRTCS
AALNAYSRVDFLAKIWICPFCYQRNQFPPHYAMISETNLPCELYPQYTTVQYTLQTNPDP
NNPSNAPQLQPVFVFVLDTCMIEEELVFAKSALKQAIGLLPEQALVGFVSFGTQAHVHEL
GFTEISKVYVFKGSKEISKEQVLEQLGLPAAGRRSTAGYPKGLQNGFTNTVVNRFLLPPS
DCEFTLNSLLDELQTDQWPVQAGHRASRCTGVALSVAAGLLGACLPGTGARIIALVGGPC
TEGPGTIVSKDLSEPVRSHKDLFKDAAPYFKKAVKFYDSLAKQLVDQGHVLDLFASALDQ
VGVAEMKVAIERTGGLVVLAESFGHSVFKDSFKLVFEDGEQSLGLCFNGMLEISCSKEIK
VQGIIGPCTSLEKKGPNVSDMVIGEGNTTTWKMCGLDKSTCLTVIFDLSSTDQSNVPETV
NPQFYLQFLTSYQDPEGKTLIRVTTVTRQWVDISVSTEELIHGFDQETAAVVMARITSLK
METEEGFDPTRWLDRNLIRFCSKFGNYRENDPSSFSLNPCFSLFPQFIFNLRRSQFVQVF
NNSPDETAYFRVLLNKENITNAAVMVQPSLISYSFNSPPQPALLDVASISADHILLLDSY
FSIVVFHGMTIAQWRNMGFQNQPEHQAFALLLEAPQVDAQIIIRDRFPVPRLVVCDQHGS
QARFLLAKLNPSATYNNATDIAPGSDIIFTDDVSLQVFCEHLQRLAVQS
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactccgatcccgaaggggttgacggcgttcggatgacatggaacgtctggccc
cgcaccaagcttgaagccagcaagtgcgtcattcccttggccgcttccatcgcaccgatc
ccccctcactcggacattcctactctcccttacgctcctctccgctgccggacatgttcc
gccgccctcaacgcctattcgcgcgttgatttcctcgccaagatctggatctgtccgttt
tgttaccagcgcaaccaatttccgccgcattatgccatgatctccgaaacgaacctgcct
tgcgaactctacccgcaatataccaccgtgcaatacacgcttcaaacgaatcccgacccc
aacaacccttccaatgctcctcaattgcaaccggtttttgtttttgtgttagacacttgt
atgatcgaggaagagctagtgtttgctaaatcggcgttgaaacaggctattggattgttg
ccggaacaagctcttgtcggtttcgtatctttcgggactcaagcacatgtccatgaattg
gggttcacggaaatatcgaaggtctatgttttcaaggggagtaaggagatttccaaggag
caggttttggagcaattaggcctccctgctgctgggcggcggtcaacggctggatatccg
aaaggacttcaaaatggatttacgaatacagttgttaaccggtttttattgcccccttct
gattgtgaattcacgctcaattcactcttggatgagttgcaaacggatcaatggcccgta
caagcgggacacagggcgtctaggtgcactggagtggccttaagtgttgcagcaggattg
cttggggcctgcttgcctggtactggtgctaggattattgctttggttggtgggccatgt
actgaaggaccaggcacgattgtatccaaagacttgtcagaacctgtacgttcacataaa
gatctttttaaggatgctgcaccatattttaagaaagcagtcaaattttatgatagtctt
gcaaaacaactggtcgaccagggtcatgttcttgacctttttgcatctgcacttgatcag
gttggagttgctgaaatgaaagttgcaattgaaaggacaggtggacttgttgttctagct
gaaagttttggtcattctgtattcaaagactctttcaagcttgtctttgaagatggggaa
cagtctcttggcctatgttttaatggcatgcttgagataagttgttcaaaagagatcaag
gttcagggaatcattggaccttgcacatcattggagaagaaaggacctaatgtttctgac
atggtcattggggagggtaacactacaacatggaaaatgtgtggccttgacaagagtact
tgcttgacagttatatttgatctttcatcaactgatcaatcaaatgttccagaaactgtg
aatccacagttctatttgcagtttctaacaagttatcaagaccctgaaggtaaaacactt
attcgagttacgactgtgacaagacaatgggtagacatttctgttagtactgaggaatta
atacacggttttgatcaagagactgcagctgttgtgatggcacgaataacttccctgaaa
atggagacagaggaggggtttgatcctacaaggtggttagatcggaatctcattcgattt
tgttccaaatttggcaactaccgggagaacgatccatcatctttttcattaaacccttgc
ttttctttgtttcctcaatttattttcaatctacggcggtcacagtttgtacaggttttt
aacaacagtcctgatgaaactgcatattttcgcgtgttattaaacaaggaaaatattact
aatgcagctgttatggttcaaccatcattaatatcatattcgttcaactcaccaccccag
ccagcattattagatgtggcttcgatttctgctgatcatattctcttgctggattcatat
ttcagtattgttgttttccatggtatgacaatagcacagtggcgcaacatgggtttccag
aatcaacctgaacatcaggcatttgcacttcttttggaagcaccccaggttgatgcccaa
attattattcgggaccgctttcctgtccccagattggttgtatgtgatcagcatggatcc
caggcaagatttttattggcaaagttgaacccatcagccacatacaataatgccaccgac
atagctccaggatcagatattatctttacagatgatgtaagcttacaagtcttctgtgag
catcttcagagattggctgtgcaatcttga
DBGET
integrated database retrieval system
