Gossypium hirsutum (upland cotton): 107910219
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Entry
107910219 CDS
T04793
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 17 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107910219
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107910219
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107910219
Peptidases and inhibitors [BR:
ghi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107910219
Ubiquitin system [BR:
ghi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107910219
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
107910219
NCBI-ProteinID:
XP_016693490
UniProt:
A0A1U8JTB7
LinkDB
All DBs
Position
D02:15757476..15765104
Genome browser
AA seq
1069 aa
AA seq
DB search
MLFIWDLGFSSLVLVLSLLPLIGFFVRRKWQLSVARQAEIKRLLILASEEAARVELEATI
EYGTVSISWNYQQCAVCYCPTTTRCARCKGVRYCSAKCQIIHWRQGHKEECHPPAIAVHQ
NHDEGSDYGQKAINQDQYGDRYEIEEKSHAKLIGTSSTESALFSSITGPALLSSSSSSVV
LDGKDDDAKVEFHADREGLSSAPESSSASFSGFSSAAGSESSDDVSVCESVSSNELDKLD
GSSSADVNLDTFWTSVVNNVDQTNPSSPKFVRLVDSVDEISKLSHSKPDQSEESQCRATS
SSGLGVSDMSEGSNAEASRFSSDFWGRTLESVPSTSVDDNESFNSYHKEGGKRALLDSGS
SLHFSFTLAGNASSSYPQVSKVKDAKLDDATQCATTLGHSKLSDGVVLSENAGLDSPNEG
NSKSLNSECTNQGECGSNNIQHVINPREAINIDVPLVGSLSSSHFEKSGSTVVTNGPSIS
NASHLSESSDSYSSSDRVHAVPNVKSGKFDDVHANFAKLSQFSSYSSNGKNGLKTSMWKV
VDQFRVSKFPKHHPFGVSNEGIFPYESFVKLYSWNKVELQPRGLVNCGNSCYANAVLQCL
TFTPPLTAYFLHGIHSKACAKKDWCFTCEFEKLILKAKDGKSPLSPMGILSQLQNIGSQL
ANGKEEDAHEFLRYAIDAMQSICLKEAGLAASGCLEEETTLIGLTFGGYLRSKIKCMKCQ
GKSERHEKMMDLTVEIEGNIGTLEEALRRFTRTEILDGENKYQCSRCKSYEKAKKKLTIL
EAPNILTIALKRFQSGKFGKLNKAIRFPEILNLAPYMSGTSDKSPIYRLYGVVVHLDIMN
AAFSGHYLCYVKNAQNKWFKIDDSMVTSTELERVLTKGAYMLLYARCSPRAPRLMKNRSK
AIPSSVNSKNPLKSNSLTYSGLDEFHPSLIHSDTPSSIESFYSKYNQLQRILEDSSSSDS
SLFSVNSDEGSCCTDSTRDSTSTDDLIDSIFGDSVQGWNSPWRSCDSDAFSSSSSSSLYL
RHSPVADLDRYSSGSPKIRSSRMDEEGKRDDLFFHSDTMSKQCRKVVVA
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgctttttatttgggatttagggttttcgagcctggtgctcgtgctttccctccttcct
ttgatcggctttttcgtaaggcggaaatggcagttatctgtagcaaggcaagcggagata
aagaggctcttgattttggcctctgaggaggcggctagagtcgagcttgaagcgactatt
gaatacggtacggtttctatttcgtggaactatcaacagtgtgctgtttgttattgtcct
actaccacgcggtgcgctcgctgtaaaggggttcgatattgttctgcgaagtgtcaaatt
attcactggcggcaaggtcacaaggaagaatgccacccacctgccattgccgtacaccaa
aatcatgatgaggggagcgattatggtcagaaggcgataaatcaagaccaatatggagat
agatatgagattgaagaaaagtcgcatgcaaagttaattggaacatcctctactgaatct
gcattgtttagttccatcacaggacctgcattattgagttcctctagctcttctgtggtt
ttagatgggaaggatgatgatgcaaaggttgagtttcatgctgatagggaaggactgagc
tctgctccagaatcttccagtgcttcattttcaggattttcgtctgcagctggtagtgaa
tcatctgatgatgtttctgtgtgtgagagcgtaagttcaaatgagcttgataaattggat
ggttcctcatctgctgatgttaatcttgacacgttttggacttctgttgtcaacaatgtg
gatcaaaccaatccatcatcccctaaatttgtcaggttggttgattctgtagatgaaatt
tctaaattaagtcatagcaagcctgatcaaagtgaagagagccagtgcagagcaactagt
tcttcaggattaggtgttagtgatatgtctgagggctcaaatgctgaggcttctagattt
tcttctgatttttggggcagaactttggaatcagttccatctacaagtgttgatgacaat
gagtcgtttaactcttatcataaagaaggcggtaaaagggccttacttgattctggatca
tccttacatttttcatttactttggctggaaatgcttcttcctcatatccgcaagtctcc
aaggtgaaagatgccaaattggatgatgctactcaatgtgctactactttggggcattcc
aagctttcagatggagtagttttgtccgaaaatgctggtttagattctccgaatgaagga
aactctaagtccttaaattctgaatgcaccaaccagggggagtgcggatctaacaatatt
cagcatgttataaatcccagagaagctatcaatatagatgttccactagtcggtagcttg
tcatcttcccattttgaaaaatcaggctctactgttgtcactaatggacctagcattagc
aatgcttctcatttgtcagagtcatctgattcttattcatccagtgacagagtgcatgct
gttcccaatgtgaaatctggaaaatttgatgatgttcatgcaaatttcgctaaattatct
cagttttcaagttattcttctaacggtaagaatggattgaaaacctcaatgtggaaagtt
gttgatcaattcagagtatctaaatttccaaaacaccatccatttggagttagtaatgag
ggaatttttccttatgaatcatttgtcaagctttatagttggaacaaggtggaattacaa
ccacgtggccttgtaaattgtggtaacagctgttatgccaatgctgtccttcaatgcttg
actttcactcctcctctgactgcttactttcttcatggaatccattccaaagcatgtgca
aagaaagattggtgtttcacttgtgagtttgaaaaattaattttgaaggctaaagatggg
aaatcaccgctgtcccctatgggaatactttcccaactacaaaatattggcagtcaactt
gctaatgggaaagaggaagatgcacatgaatttttaaggtatgctattgatgctatgcaa
tctatttgtcttaaagaagctgggttggctgcatcaggttgtttagaagaagaaacaact
ttaattggcttaacatttggaggctaccttcggtcaaagataaagtgcatgaagtgccaa
ggcaagtccgaacgtcatgaaaaaatgatggacctaacagttgaaattgaaggaaatata
ggaaccctagaagaggctcttcggcggtttactaggactgaaattctggatggagaaaat
aagtaccaatgtagcagatgcaaatcttatgagaaggccaaaaagaagttgacaatatta
gaggctccaaatattcttacaattgcattgaagagatttcagtccggtaaatttggaaag
cttaacaaagcgattcggttccctgagattttgaacttggcaccatatatgagtgggaca
agtgataaatcacccatatacaggctctatggagtagtggtccatttggatatcatgaat
gcagcattttcgggtcactacttgtgctatgttaaaaatgctcaaaacaagtggtttaag
attgatgacagcatggtaacatctacagaactcgaaagagttctaacaaaaggagcatat
atgcttctttatgccaggtgctcacctcgggccccaagattgatgaagaacagaagtaaa
gccattccatcgagtgtcaattcaaaaaatccgctgaagtccaattctttgacatattcg
ggtcttgatgaattccaccccagcttgattcattcagatactcctagcagtattgaatct
ttttattcaaaatacaatcaactgcaaaggattttagaggactcgtcgtcaagtgatagt
tctctttttagcgtcaattctgatgaaggttcctgctgtactgatagcacacgtgattct
accagcactgatgacttaatagattctatatttggtgattcagtccaagggtggaacagc
ccatggaggagttgtgattcagatgctttttcttcatcatcttcttcctccctttacttg
aggcattcacctgttgctgatttagaccgatatagttcgggttcacccaaaattcgcagc
tctcgaatggatgaggaaggtaagcgagatgatctctttttccactccgacacgatgagt
aaacaatgtagaaaggtagtagtagcttag
DBGET
integrated database retrieval system
