Gossypium hirsutum (upland cotton): 107910371
Help
Entry
107910371 CDS
T04793
Name
(RefSeq) 3-ketoacyl-CoA synthase 1
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00062
Fatty acid elongation
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
ghi04626
Plant-pathogen interaction
Module
ghi_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
107910371
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
107910371
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
107910371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
ACP_syn_III
Chal_sti_synt_N
Motif
Other DBs
NCBI-GeneID:
107910371
NCBI-ProteinID:
XP_016693687
UniProt:
A0A1U8JTT8
LinkDB
All DBs
Position
D08:complement(48171913..48173874)
Genome browser
AA seq
533 aa
AA seq
DB search
MDRKSIEMDKERLTAEMAFKDSSSAIIKIRRRLPDFLQSVKLKYVKLGLGYGYSCNHATL
LILPLMFATLVQLSGLKPDRVYDLWTINQAFRLQSIDAATRLAASLILFFLCGLYFSKRS
RPVYLVDFACYKSQDDRKLSVDSFLKMTEETGAFTDDTLQFQRKIATRSGLGDETYVPRG
ITSRPPNLCMEEARSETEAVMFGALDSLFEKTGVRPKDIDILIVNSCLFNPTPSLSAMVI
NHYKLRTDIKSYNLGGMGCSAGLISVELAKNLLRANPNTYAVVVSTENITQNWYFGNDRS
MLLCNCIFRMGGAAVLLSNKPRDKARSKYQLLHLVRTHKGADDKHYNCVYQREDDKGIVG
VSLGRELMAVAGDALKTNITTLGSLVLPFTEQLKFFVSLVRKKVLKARVKPYIPDFKLAV
EHFCIHAGGRAVLDEIQKNLELTDWHMEPSRMTLHRFGNTSSSSLWYEFAYTEAKGRISG
GDRVWQIAFGSGFKCNSAVWRALRSTPMSESRCNPWKDEMDKYPVKLDISISK
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggataggaaaagcatagagatggataaagaaaggctgacggcggaaatggcattcaaa
gactcctcctccgccatcatcaaaatccgtcgaagattgcctgatttccttcaatccgtt
aagcttaagtacgttaagttaggcttaggctatggttattcatgtaaccacgccaccctt
cttatactaccacttatgttcgccactttggttcagttatccggtctaaaacctgaccgg
gtttacgatttatggactattaatcaagcttttcggcttcagagcattgatgccgctaca
agactagctgcttcattaatcctattcttcctatgtggtctctacttttcgaagcggtcc
aggccggtttatctcgtcgatttcgcctgttacaaatcccaagatgatcgtaaactgtca
gttgactcgttcctcaagatgactgaagaaaccggagctttcaccgacgacacgcttcaa
tttcaaagaaagatagcaacccggtccggtttaggcgatgagacgtatgttccaagaggt
ataacatctagaccgccgaacctgtgcatggaagaggctcggtctgaaaccgaagctgtt
atgtttggagcactggactccctttttgagaaaaccggtgttaggccaaaggatattgac
atcctcatcgtgaattcctgtttatttaaccccacaccatctctctcagccatggtaatc
aaccattacaagctacgtacagatatcaagagctacaatctgggtggaatggggtgcagt
gcagggcttatatccgtggagctagctaaaaacctccttcgagccaatcctaacacgtat
gccgtggtggtgagtaccgaaaacattacccaaaattggtatttcgggaacgaccgctcc
atgttgctatgcaattgcatattccgcatgggtggagccgctgtgcttttgtcgaacaag
ccacgggacaaggctcgttccaagtaccaactccttcacttggttcggacccataaaggt
gccgacgataaacattacaactgcgtttaccaaagagaagatgacaaaggaattgttggg
gtttcattgggtcgggaactgatggcggtggctggggatgcattgaaaaccaatattact
actctaggttccctggttttgccattcacagagcagttgaagttctttgttagtcttgtt
cgaaagaaggttttgaaagccagggttaagccttacatacctgattttaagctagcagtc
gagcatttttgtatccatgcaggtggaagggcggttttggatgaaatacagaagaatttg
gagctaacagattggcatatggagccatcaaggatgactctacatagatttggaaacacc
tcgagcagctcactgtggtatgagtttgcatacacggaggccaagggtcggatctcgggt
ggtgaccgagtgtggcagattgcattcgggtcggggttcaagtgtaacagcgcagtttgg
agagctcttagatctactccgatgagtgagtcaaggtgtaacccatggaaggatgaaatg
gacaagtacccggtcaagcttgatatctccatctccaagtag
DBGET
integrated database retrieval system