KEGG   Gossypium hirsutum (upland cotton): 107910407
Entry
107910407         CDS       T04793                                 
Name
(RefSeq) F-box protein SKP2A
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107910407
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107910407
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     107910407
SSDB
Motif
Pfam: LRR_6 LRR_4 F-box-like F-box LRR_At5g56370 LRR_Zer-1 LRR_At1g61320_AtMIF1 F-box_4 RsmF_methylt_CI LRR_8
Other DBs
NCBI-GeneID: 107910407
NCBI-ProteinID: XP_016693725
UniProt: A0A1U8JU07
LinkDB
Position
D02:complement(11459079..11462226)
AA seq 372 aa
MIGEAKVGNEDLNLCFEKLMMVAAGNSEGVKMNGVGITEWKDIPVELLLRIVSLLDDQTA
IVASSVCSGWRDAVCLGLTQLCLSWCRKNMNNLVLSLAPKFTRLQTLILRQENPQLEDNA
VETISKFCHDLQDLDLSKSFKLSDRSLYALAHGCPNLKKLNISGCTSFSDEALAYLTNFC
RKLKILNLCGCVKAATDHALQAIGRNCNMLQSLNLGWCDNVGDLGVMSLAYGCHDLRCLD
LCGCVRITDDSVIALANECLHLRSLGLYYCRNITDRAMYSLAHSRVKNKGLTWESSMKGR
YEDDGLKSLNISQCTALTPSAVQALCDTFPALHTCSGRHSLVMSGCLNLTSVHCACAVQA
HRTFNTIFHTAH
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgattggtgaagcaaaagttgggaatgaagacttgaacttatgctttgagaagctgatg
atggttgcagctgggaatagtgagggagttaagatgaatggtgtggggatcactgagtgg
aaagatatccctgtggagctgctgttgagaatcgtttcactactcgatgatcagactgct
atcgttgcttccagtgtctgtagtgggtggagggatgccgtttgcttgggtctcacacaa
ctctgtctctcatggtgtagaaagaacatgaacaatttggttctatctcttgcacctaaa
ttcaccagactgcaaactctgatattgcgccaagagaatccacagctcgaggacaatgct
gtcgagactatttcaaagttttgtcacgatctgcaggacctggacctcagtaaaagtttc
aagcttagtgatcgctccttgtatgcattggctcacggttgtcctaaccttaaaaagctt
aacatcagcggctgcacatcattcagcgacgaagctctcgcgtatttgactaatttttgt
cgaaaactaaaaatattaaatctgtgcggatgtgttaaagctgcaactgaccatgcactg
caggctattggacgaaactgcaatatgttgcaatctttgaatctgggatggtgtgacaat
gttggcgatctcggagtcatgagtttagcatatggatgccatgatctccgatgcctggac
ctgtgtggttgtgttcgtataacagatgatagcgtgattgctttagcaaatgagtgcctc
catttgaggtcgctcggactgtactattgccgtaacatcacggacagggcgatgtactca
ttggctcacagccgagtgaagaacaaaggtttgacgtgggagtcgtcgatgaaaggtaga
tatgaagatgatggtctaaaaagtctgaatataagccagtgtacggcactgactccatca
gcagttcaggctttatgtgacacattccctgcacttcatacctgctctggaaggcactcc
cttgttatgagtggttgcttgaacttaacctccgtgcattgtgcttgtgcggttcaagct
caccggaccttcaacactattttccacacagctcattga

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