Gossypium hirsutum (upland cotton): 107910417
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Entry
107910417 CDS
T04793
Name
(RefSeq) ribosome maturation protein SBDS
KO
K14574
ribosome maturation protein SDO1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107910417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107910417
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
107910417
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GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
zf-C2H2_jaz
zf-met
TMEM61
Motif
Other DBs
NCBI-GeneID:
107910417
NCBI-ProteinID:
XP_016693736
UniProt:
A0A1U8JTY0
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Position
D02:complement(11328309..11330917)
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AA seq
368 aa
AA seq
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MSKTLVQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSRVEKDLDEVLQSHTVYS
NVSKGVLAKTKDLVAAFGTDDQTKICLEILEKGELQVAGKERESQFSSQFRDIATIVMQK
TINPETQRPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRQLQNNFPIKRSPMRLRLIV
PGQNFHSLCEKLNEWGATIVSKDESGTQLSVICEIEPGLFRECDSLVRNLQGRLEILSVS
VHAEGDTQVDNYDDEDISSQLPKDSAESASSRLPPESSDSVVQLSEKIQKHTISSGNGNA
EGEAKQHKCSTCNAFVGDSKQYRDHFKSEWHKHNLKRKTRQLPPLTAEECLADVELSDSK
SDLQDYSF
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaacgctggtgcaaccgatagggcaaaagcggctgacgaatgtggccgtcgtg
cgtttgaagaaacacggcatgcgatttgaaatcgcttgctacaaaaacaaagtcctctca
tggcgttcccgggtcgagaaagatttggacgaggttctacagtcccatacggtgtactcc
aatgtttcgaaaggggttcttgctaagaccaaagatttggttgctgcttttgggactgat
gatcagactaaaatttgtttggagattttggagaaaggggagctacaagttgctgggaag
gaaagggaatcgcaattttcgagtcagtttcgggatatagcgacgattgtcatgcaaaaa
accatcaatcctgaaactcagcgcccttacaccattagtatgattgagagactaatgcat
gaaattcatttcgctgttgatcccaatagtagttccaagaagcaggctctagaggttatt
cgtcagcttcagaataacttccccataaaacggtcgcccatgagattacgactcatagtt
cctggacagaactttcattctctttgtgagaagctgaatgaatggggtgctaccattgtt
tcaaaagatgaatccggaactcagctgtcagttatttgtgaaatagaaccagggcttttc
cgagaatgtgactcccttgtgaggaatttacagggtagattggaaatactttcagtgtct
gtacatgccgagggggatacgcaagtggataattacgatgatgaggatatatcatcacag
ctgcccaaggattcggccgagtcagcatcatcacgtttacccccagaatcttctgattca
gttgtccaactaagtgagaaaatacaaaagcataccatctcttcaggaaatgggaatgct
gaaggggaggcaaagcaacataagtgcagcacatgcaatgcatttgtgggggattccaaa
cagtacagggatcactttaagagtgagtggcacaagcataatttaaaacggaaaaccagg
caacttcctcctcttactgcagaagagtgcttagctgatgtggaattgagtgactcaaaa
tcggatttgcaggattattcattttga
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