Gossypium hirsutum (upland cotton): 107910439
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Entry
107910439 CDS
T04793
Name
(RefSeq) 15-cis-zeta-carotene isomerase, chloroplastic
KO
K15744
zeta-carotene isomerase [EC:
5.2.1.12
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00906
Carotenoid biosynthesis
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Module
ghi_M00097
Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
107910439
Enzymes [BR:
ghi01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.12 zeta-carotene isomerase
107910439
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GFIT
Motif
Pfam:
NnrU
ICMT
PEMT
Flavi_NS4A
Motif
Other DBs
NCBI-GeneID:
107910439
NCBI-ProteinID:
XP_016693764
UniProt:
A0A1U8JZN5
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Position
D02:complement(10716092..10718894)
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AA seq
366 aa
AA seq
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MATCLVVANSLFRPPKPILPHKHHPLQPISSHSLPKSPLNSTFLKPHFSHSDSCRFRLIA
AASLGETDASSDEPLPLVGEDSAAFDLGTQNIVSWVYFTIILGVVLFVLDVIWIDNSTGF
GKAFIDAVSTLSDSHEIVMLALILIFATVHSGLASFRDMGEKILGKRAYRVLFAGVSLPL
AVSTVVYFINHRYNGVQLWQLQNGPGVHQLVWLSNFISFFFLYPSTFNLLEVAAVEQPKV
HLWETGIMRITRHPQMVGQVIWCLAHTIWIGNSVAVAASVGLIGHHLFGVWNGDRRLAVR
HGEAFEVVKKRTSIIPFAAILDGRQKLPKDYYKEFIRLPYLAITAMTLGAYFLHPVMQAA
SFRLHW
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttgtcttgttgtagccaactccttgttccgtccacccaaacccatcctcccc
cataaacaccaccctcttcaacccatctccagtcactccctacccaaatccccactcaat
tccaccttccttaaaccccatttttcccactcagattcttgcagattccgattgattgcc
gcagcttcccttggggaaaccgatgcctcctcagacgagccccttcctttggtcggtgaa
gactctgccgccttcgatttggggacccaaaacattgtttcttgggtttattttactatt
attttgggtgttgttctttttgttcttgatgttatctggattgataattctactggtttt
ggaaaagcttttattgatgctgtttcgaccctctccgacagccatgagattgtaatgttg
gccctcattctcatatttgccactgtccatagtggcttggctagctttcgggacatgggc
gagaagatcttgggaaaacgtgcataccgtgttctatttgctggcgtatcccttccgttg
gctgttagcacagttgtgtacttcatcaaccacaggtataatggagtgcagttatggcag
cttcaaaatggtcctggagtccatcaacttgtttggctctcgaattttatttccttcttt
ttcctatatccttctacctttaatctattagaggtagcagctgttgaacagccgaaagtg
catctgtgggaaactggcatcatgagaatcacccggcatccacagatggtagggcaggta
atctggtgcttggcccacacaatttggattggaaactctgtagctgttgcagcctccgtt
ggtttgatcggacatcatctatttggcgtatggaatggtgataggagactagctgtacga
catggggaggcttttgaagttgtaaagaagcgaacaagcatcatcccttttgcagcaatc
ctcgatggccgccaaaaattgcctaaagattactacaaagaattcattcgattgccctat
ttggctatcactgcaatgacactaggtgcatattttctgcatccggtaatgcaggcagct
agtttccggctccattggtag
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