Gossypium hirsutum (upland cotton): 107910463
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Entry
107910463 CDS
T04793
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107910463
Spliceosome [BR:
ghi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107910463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RL
Calcipressin
DUF4523
RRM_3
TGF_beta
Motif
Other DBs
NCBI-GeneID:
107910463
NCBI-ProteinID:
XP_040946783
LinkDB
All DBs
Position
A02:complement(10894754..10900811)
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AA seq
438 aa
AA seq
DB search
MAEASKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDIPSAINAMQF
YTNVQPTIRGRNVYVQFSSHQELTTMDQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQV
FSPHGFVEKIVTFQKSAGFQALIQYQGRQNAISARTSLQGRNIYDGCCQLDIQFSNLDEL
QVHYNNERSRDFTNPNLPTEQKGRSSQHPGYGDAGVGFPQMANAAAIAAAFGGGLPPGIS
GTNDRCTVLVSNLNPDRIDEDKLFNLFSLYGNIVRIKLLRNKPDHALVQMGDGFQAELAV
HFLKGAMLFGKRLEVNFSKHPNITQGTDTHEYMNSNLNRFNRHAAKNYRYCCSPTKMVHL
STLPQDVTEEEIVNHLAEHGTIVNTKLFEMNGKKQALVMFENEEQATEALVSKHATSLGG
SIIRISFSQLQTIRENSQ
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcttctaaagtcattcatgttcgcaacgttggccatgaaatttctgaaaat
gatttgcttcaacttttccagccatttggagtgataacaaagcttgtaatgctccgtgca
aagaatcaggctcttctccaaatgcaagatattccttcagccatcaatgcaatgcagttc
tacactaatgttcaaccaactatcagggggaggaatgtgtatgttcaattctcatcacat
caagaactgacaaccatggatcagaatgctcaaggacgaggtgatgagccgaatcgaatc
ctcctggtcacaatccatcatatgctttatcctattactgtggaagtgctacaccaggtt
ttctcacctcatggatttgtggagaagattgtcacatttcagaagtcggctggctttcaa
gccctgatccagtatcaaggacgccagaatgctatctcagctagaacttctcttcagggc
cgtaatatttatgatggctgctgccagcttgatatacagttttcaaaccttgatgaatta
caagtccattataataatgagcgatcaagggatttcacaaacccaaatctcccgacagag
cagaagggcagatcatcacagcatcctgggtatggtgatgcaggagttggattcccacag
atggctaatgcagctgcaattgcagcagcttttggaggaggtttgcctccaggaataagt
gggacaaatgataggtgcacagtgctcgtttccaatctaaatcctgatagaatagatgag
gataagctattcaacttgttctcactctatggaaacattgtgagaattaaacttctacgt
aataaaccagatcatgctcttgttcaaatgggtgatggcttccaggctgaactggcagta
cattttctcaagggggccatgctatttgggaagcgactggaggtcaatttttcaaaacat
ccaaatataacacagggaactgatacccatgaatatatgaactcaaatctcaaccgcttt
aatcgccatgctgcgaagaactaccgttactgctgctccccaacaaagatggtccatctt
tctactttacctcaggatgtcactgaagaggaaattgtgaaccacttggcggaacatggc
accatcgttaataccaagctctttgaaatgaacggaaagaagcaagcccttgttatgttt
gaaaatgaggagcaagctacagaagcccttgtttccaagcacgcaacctcacttggtggg
tcaataatccgaatttcattctctcagttgcagacaataagagagaactcacagtaa
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