Gossypium hirsutum (upland cotton): 107910526
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Entry
107910526 CDS
T04793
Name
(RefSeq) novel plant SNARE 13
KO
K08494
novel plant SNARE
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107910526
Membrane trafficking [BR:
ghi04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
107910526
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
MCPsignal
GCIP_C
Prominin
Helo_like_N
Cob_adeno_trans
Occludin_ELL
Syntaxin_2
Ndc1_Nup
TMPIT
Motif
Other DBs
NCBI-GeneID:
107910526
NCBI-ProteinID:
XP_016693868
UniProt:
A0A1U8JYQ5
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Position
D02:complement(8778447..8781829)
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AA seq
267 aa
AA seq
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MATTELQMSPQLEQIHGEIRDLFRALSNGFQRLDKMKDSNRQSKQLEELTGKMRECKRLI
KEFDREIKDEESKNPPEVNKQLNDEKQSMIKELNSYVAMRKTYMNTLGNKKIELFDMGAG
VSEPTADENVKMASSMSNQELVDHGMKTMDETDQAIERSKKVVEQTIEVGTQTAGTLKGQ
TDQMGRIVNELDTIQFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNP
NNKDIRDIPGLAPPAPSRRLLYLRSPQ
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggccaccacggagttgcagatgagtcctcagttggagcagatccatggcgaaatccgc
gatcttttccgtgctctttcaaatggcttccagagactggataagatgaaagattccaat
aggcaaagcaaacagctggaagagcttactggcaagatgagggaatgtaaaagattaatc
aaggagtttgatcgtgaaattaaagatgaggaaagcaaaaatcctcccgaagtgaacaag
caactcaatgatgagaagcagtctatgatcaaagaactgaattcgtatgtagctatgagg
aaaacatacatgaatacccttggtaacaagaaaattgaactctttgatatgggagctgga
gtcagtgaacctacagctgatgaaaatgttaaaatggcatcatcaatgtcaaaccaagag
cttgttgatcatgggatgaaaacaatggatgagactgatcaggccattgaacgctcaaaa
aaggttgttgaacaaacaattgaagtaggaactcaaactgctggtactctaaaaggacaa
actgatcaaatgggccgtattgtaaatgagctggatacaattcagttttcaattaagaag
gcctcccagctggtgaaggagattggtaggcaggtagccactgataaatgcatcatgcta
tttctttttcttatcgtatgcggtgttatagccatcatagttgtgaagattgtgaatccg
aacaacaaagatatcagagatattccaggattggcaccaccagcaccttcgaggagattg
ttatatctaaggagcccgcagtaa
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integrated database retrieval system