Gossypium hirsutum (upland cotton): 107910541
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Entry
107910541 CDS
T04793
Name
(RefSeq) YTH domain-containing protein ECT4-like
KO
K20102
YTH domain-containing family protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107910541
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107910541
SSDB
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GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
107910541
NCBI-ProteinID:
XP_016693884
UniProt:
A0A1U8K005
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Position
D02:complement(8573516..8577501)
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AA seq
654 aa
AA seq
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MYQEGAPEIVIDQGMYYPTATNYGYYCTGFESPVEWEDHQNIFSADGPDVQFAGAQTEPL
PYVYYTPSYGYAQSPYNPYNPYIPGAVVGDGSFVGAQQYYPFPPYQNPVSPTAYVPVLIQ
PDGIPSSSTDSFLDTHASIGTRPDGRGVRYNLASASAAASRKSAPNQADSLSRVTDGQSK
HYAIQESISASSGSASARAHQVRVASGSVQPIGNIPGGKLPSYRNQLKTDLPVGNAISDY
GASSPGRGVLDRLRPKIHVSRVFNDAHGSLDSWAEQNRGPRTNRSKNQLMVKAYTSKAGN
SDAEGNIIIYTDQYNKDDFPIDYVEAKFFVIKSYSEDDVHKSIKYNVWSSTPHGNKKLGS
AFEDAEKIAAGKPSGCPIFLFFSVNASGQFCGVAEMIGPVDFQKDMDFWQQDKWSGSFPV
KWHIIKDVPNSHFRHIILGNNENKPVTNSRDTQEIMYKQGMEMLKVFKNHAMKTSLLDDF
MFYENRQRIMQEEKAMQLIKSIENPVLAPAFDPVNKLNRVELLLNEHERSSKQSDPELLR
TIVPSSNQPVSTDCDRTNARRMNESSGKIAVEAKDDASTLKISSLSINPKQDESKISTDA
ATKSDAVEVVNIGSVTVKVNKFTDSPGFLTVGTIPLNPKTPQLDEGGVSAKKGT
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaggaaggagcccctgagatcgttattgatcagggaatgtactaccctacagct
accaactatggatattattgtacaggttttgaatcacccgttgaatgggaggaccaccag
aatatttttagtgcagatggtccagatgtacaatttgcgggtgcccaaactgaacctttg
ccttatgtatattacacacctagctatggatatgcacagtctccatacaacccatacaat
ccttatatacctggtgccgtggtgggtgatggctcatttgtaggagcacaacaatattac
ccctttcctccttatcagaaccctgtatcaccaactgcttatgttcctgttctcattcaa
ccagatggcattccaagtagttcaacagactcttttttagatactcatgcatcaattggt
actcgacctgatggaaggggcgtgagatataaccttgcttcggcatctgcagccgcttcc
agaaaatctgctccaaatcaggcagattccttgagtagggtgacagatggacaaagtaag
cattatgcaatccaggaaagcatttctgctagttctgggtcagcttcagcacgtgctcat
caggttagagttgcttctggatcggttcagcccattggcaacattcctggtgggaaactc
ccatcttatcgtaatcaactaaaaacagatcttcctgttggtaatgccatttctgactat
ggtgcaagttcacctggacgaggtgtgctggatagactgcgacccaagatccatgttagc
agagttttcaatgatgcacatggatccctggattcatgggctgaacagaatcgaggccct
agaaccaaccgatcaaaaaatcaactcatggttaaagcctatacaagtaaagcaggaaat
agcgatgctgagggaaacattattatttatactgaccaatataacaaggatgattttcca
attgactatgttgaagcaaagttttttgtaataaaatcgtatagtgaggatgatgtacac
aagagcattaaatataatgtttggtcttcaacaccccatgggaacaagaaactgggcagt
gcttttgaagatgcagagaaaatagctgcaggaaaacctagtggctgccccattttcctc
ttcttttctgttaatgccagtggacaattttgtggcgtagcagagatgattggtccagtt
gattttcagaaggatatggatttttggcaacaagataagtggagcggtagcttccctgtc
aagtggcacatcattaaagatgttcccaacagccattttagacacatcatattaggcaat
aatgaaaacaagccagtgactaatagcagggatacacaagagataatgtacaagcaaggt
atggagatgctgaaagtattcaaaaatcatgcgatgaagacctctctacttgatgacttt
atgttctatgaaaatcgtcagagaatcatgcaggaagagaaagccatgcagctaataaaa
agcattgagaatccagtcctagcacctgctttcgatcctgtcaataagctaaaccgtgtt
gagctactcctgaatgaacatgagagaagttccaagcaaagtgatcctgaactattgaga
acaattgttccttcatctaatcagcctgtttctacagattgtgataggactaatgctaga
aggatgaatgaaagttcagggaaaattgcagttgaagctaaagatgatgcatctacttta
aagattagttcactcagcataaatccgaagcaggatgagtctaaaatctctacagatgct
gctactaaaagtgatgctgttgaggtggtaaacataggatcagtgacggtaaaagtcaat
aaatttactgactcacctggttttttaacagtaggcactattcctcttaatcccaagacc
ccacagcttgatgaagggggcgtgtctgctaaaaagggtacttga
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