Gossypium hirsutum (upland cotton): 107910638
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Entry
107910638 CDS
T04793
Name
(RefSeq) developmental protein SEPALLATA 1
KO
K09264
MADS-box transcription factor, plant
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107910638
Transcription factors [BR:
ghi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
107910638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
K-box
SRF-TF
HalX
DUF2252
STX6_10_61_N
DUF1192
Motif
Other DBs
NCBI-GeneID:
107910638
NCBI-ProteinID:
NP_001313971
UniProt:
I6MN89
LinkDB
All DBs
Position
A07:complement(82685380..82690459)
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AA seq
245 aa
AA seq
DB search
MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
SSMLKTLDRYQKCSYGAVEVSKPAKELESSYREYLKLKARYEELQRTQRNLLGEDLGPLN
SKELEQLEHQLESSLKHVRSTKTQYMLDQLTELQNKEQMLMETNRALSIKLEEISARNQF
RASWEGGEQSVAFTNQQAQSMGLFQPLECNPTFADRVLQSCCFRPDGLQQLMLRKSMGFI
PGWML
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggggagaggaagagtagagttgaagaggatagagaacaaaataaatagacaagttaca
tttgcaaagagaagaaatgggttgctcaagaaagcttatgagctctcagttttatgtgat
gctgaggttgctcttattattttctctaaccgtggcaagctctatgagttttgtagcagt
tctagcatgctcaaaacacttgatagataccagaaatgcagttatggtgcagtggaagtt
agcaagccagccaaggagcttgagagcagctacagggagtacctaaaactgaaagctaga
tatgaggaactgcaacgaactcagaggaatctccttggtgaagacttgggtccattgaac
tcaaaggagcttgagcagcttgagcatcaactagagtcatccttgaaacatgtccgctcc
accaagacccaatatatgcttgaccagcttactgaacttcagaataaggaacaaatgcta
atggaaactaacagggctttgtcaataaagcttgaagaaattagtgccagaaaccagttt
cgagcatcatgggaaggtggtgagcaaagtgtagcattcactaaccagcaggctcaatct
atggggttgtttcagccattggaatgcaatccaacttttgcagatagggtactgcaatcc
tgttgcttcagaccagatgggctgcaacaactcatgctccgcaagtcaatggggtttatc
cctggatggatgctctaa
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