Gossypium hirsutum (upland cotton): 107910680
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Entry
107910680 CDS
T04793
Name
(RefSeq) alpha-amylase 3, chloroplastic-like isoform X1
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00500
Starch and sucrose metabolism
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
107910680
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
107910680
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Gene cluster
GFIT
Motif
Pfam:
Ig_N_CWD1
Alpha-amyl_C2
Alpha-amylase
DUF5089
Glyco_hydro_70
GULLO2-like_3rd
Motif
Other DBs
NCBI-GeneID:
107910680
NCBI-ProteinID:
XP_016694119
UniProt:
A0A1U8K0N5
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Position
D02:complement(38405030..38417976)
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AA seq
877 aa
AA seq
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MATLAVGSLLQNPRLSSPRGQKLLLNLKPLRSLDLDCSPHRKLLCSRGACFSNSNPCGKF
YIVKASSTDTAPIDTFSSADILYEQTFPVNRIEKVEGKLLIRLDQSKDQLNWRLTIGCSL
SGKWILHWGVSYVGDTGSEWDQPPQDMWPHGSIPIKDYAIETPFKKPSKDDTFHEVKIDF
NPSSAIEAIHFILKDEETGASYQHKGRDFRVSLVNYLEDDGNMIHAKSSFGKWPDAVEQL
PNMVLKAEASCDSKNENRRLEGFYEEQPIVKEVSVGNMVNVAIRKFPDAANIVLHLETDI
PGDVVVHWGVCRDDAKTWEIPAVPYPPETTVFRNKALRTLLQPTGNGSRALFTLDEKLDG
FLFVLKLDANSWVNFQGNDFYIPLSSARSVKGQSDSESEETSGKAHTDGIINEIRNLVSG
LNSEKSLQTKVKEAKESILNEIEKLAAEAYSIFRSSTPSYPEEDSDADDAEPTINISSGT
GSGFEILCQGFNWESNKSGRWYMELKEKASEISSLGFTVIWLPPPTESVSPEGYMPKDLY
NLNSRYGTIDELKDLVKSLHGVGLKVLGDVVLNHRCAHYQNQNGVWNIFGGRLNWDDRAV
VGDDPHFQGRGNKSSGDNFHAAPNIDHSQDFVRKDLIEWLCWLREEIGYDGWRLDFVRGF
WGGYVKDYLDASEPYFAVGEYWDSLSYTYGEMDHNQDAHRQRIVDWINATNGTAGAFDVT
SKGILHSALERCEYWRLSDQKGKPPGVVGWWPSRAVTFIENHDTGSTQGHWRFPGGKEMQ
GYAYILTHPGTPAVFYDHIVSHHRSEIGALISLRNRNKIHCRSIVEIVKAERDVYAATID
DRVAMKIGPGYYEPPSGPQRWSLALEGYDYKVWEASS
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggccacccttgccgtcggttcccttctccaaaaccctaggctatcgtctcctcgcgga
caaaagttgttgttaaacttaaagcctcttcgctcattggatttggattgttctccacat
agaaagcttctctgctctcgtggtgcttgcttctctaactccaacccttgcgggaagttt
tatatcgttaaagccagctcaactgatacagctcctattgacaccttttcttccgctgac
atcttgtacgaacaaacttttcccgtcaaccgaattgaaaaggtggagggaaaactgttg
atcaggttggatcaatcaaaggatcagctgaattggcgacttacaataggatgtagtctt
tcaggaaagtggattcttcattggggagtctcttatgttggtgatactggcagtgaatgg
gatcaaccacctcaagacatgtggcctcatggttcaattcccattaaagactacgcaatt
gagacgcccttcaagaagccgtctaaagatgatacatttcatgaagtaaagatagatttt
aatcccagcagtgcgattgaagctatacattttatcctcaaggatgaagaaactggagcc
tcgtatcagcacaaaggtcgagattttcgggtctctcttgtgaattacctcgaggatgat
ggcaatatgattcacgcgaaaagcagctttggcaaatggccagatgctgtggagcaactc
cctaacatggtacttaaagcagaagcatcatgtgactctaaaaatgagaacaggcgactt
gaagggttctatgaagagcagcccattgtaaaagaagtttctgtcggtaacatggtcaat
gttgcaattaggaagttccctgatgcagcaaatattgttctacatttagaaactgacata
cctggagatgttgtagttcactggggggtttgcagagatgatgctaaaacatgggaaata
cctgctgtcccatatccacctgaaacaactgtgttcaggaacaaggctttacgcacctta
ttgcagccaacaggaaatggatcaagggcattgttcactttagatgaaaaacttgatgga
tttctttttgttctaaagctggatgctaacagttgggtgaactttcaaggaaatgacttc
tatattcccctctctagtgccagaagtgttaagggtcaatctgatagtgaaagtgaagaa
acttctggtaaagctcatactgatggtataatcaatgagatacggaacttggtcagcggc
cttaactctgagaagagtttgcagactaaagtaaaggaagcaaaagaaagcattcttaat
gaaattgaaaagctagccgctgaagcctatagcatcttccggagctccactccatcctat
ccagaggaagattcggatgctgatgatgcagaacccactattaacatatcctctggaaca
ggctcaggttttgaaatattgtgccaaggtttcaactgggaatctaataaatctggacga
tggtatatggaactcaaagaaaaagcttctgaaatatcttcacttgggtttactgtaatt
tggctgccaccaccaaccgagtctgtgtcacctgaaggttacatgccgaaggacttgtat
aatttaaattccaggtatggaacaatcgatgagctgaaggacctcgtaaaaagcctccat
ggagttggtttgaaagttcttggtgatgttgtattgaatcaccgttgtgcacactatcaa
aatcagaatggtgtttggaatatatttgggggtcgcttgaattgggatgatcgtgcagta
gttggagatgatcctcattttcagggcaggggtaacaaaagcagtggagataatttccat
gctgctccaaacattgatcattcacaagatttcgtaaggaaggatctcatagagtggcta
tgctggctaagagaagaaattgggtatgatgggtggaggctggattttgtcagaggattt
tggggtggttatgtcaaggactacttggatgcaagtgaaccatacttcgcggtgggtgag
tattgggattctctcagttacacatatggtgaaatggaccacaatcaagatgcccaccga
cagagaattgtcgactggatcaatgctactaacggaactgccggtgcatttgatgtcaca
agtaagggaattcttcattcggcactggaaagatgtgaatattggcgattatcggatcag
aaagggaagcctcctggggttgttggatggtggccctctcgtgctgttacctttatagag
aatcatgacactggttctacccagggtcattggaggtttccaggtggaaaggaaatgcaa
ggatatgcatatatcttgacacacccaggaacaccggctgtgttttatgatcacattgtc
tcccaccatcgctcagagattggcgctcttatctctctcagaaacagaaacaaaatccat
tgccggagtatagttgaaattgtgaaggcagagagggatgtatatgcggccaccatagac
gacagagttgcaatgaagattggaccaggttattatgagcctccaagtggaccccaaaga
tggtccttagctcttgagggatacgattacaaggtctgggaagcatcttcttaa
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