Gossypium hirsutum (upland cotton): 107910936
Help
Entry
107910936 CDS
T04793
Name
(RefSeq) vacuolar protein sorting-associated protein 51 homolog isoform X1
KO
K20296
vacuolar protein sorting-associated protein 51
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107910936
Membrane trafficking [BR:
ghi04131
]
Protein recycling
Others
EARP complex
107910936
Endosome - Golgi transport
Tethering complex
GARP complex
107910936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS51_Exo84_N
Sec5
Dor1
COG5_N
EXOC6_Sec15_N
COG2_N
Vps54_N
Motif
Other DBs
NCBI-GeneID:
107910936
NCBI-ProteinID:
XP_040961943
LinkDB
All DBs
Position
D11:10705397..10741078
Genome browser
AA seq
782 aa
AA seq
DB search
MVDRAKMATDDIPLDDKAKRMRDLLSSFYYPYHGSSPKAHSNYENLDSINSASFDPEHYM
NLLVQKSNLEELLRKHVEMAAEIKNLDTDLQMLVYENYNKFISATDAIKWMKSNIVGMEA
NMEQLLDKIMSVQSRSDRVNTSLFEKREHIEKLHRTRNLLRKVQFIYDLPARLAKCIKSE
AYADAVKFYIGAMPIFKAYGDSSFQDCKGASEDAIIIILKNLQGKLFSDSESIQARAEAA
VLLKQLDFPVDSLQAKLLEKLERSLGDLQLKTNEIVNVLREPNDPSKQGKGFDSIPGIGH
EVSVHGFAEAIRAYRVIFPDSESQLIKLAQNLVIKHFEITEQRVKRRISSTNFLGALRAI
WDDVLLMDGVLSEAALSNFSLEVAHATVKKYVASTFTYLLQDISDALLKVKVSPKEAAEE
HPLQVALEASKNTVLQGSMDVLLDFRQLLDDELGLLVKLRAFIIDWVQEGFQDFFKSLDG
CFLLLSGRKNSSSQDQGFSEGALGEKVLAGLVLVLAQLFVFIEQTAIPRISEEIAVSFSS
GGARGHENGHVFVSGEICQLFQLGGEKLLHHYINIRTRRVSTLLRKRFTTPNWVKHKEPR
EVHMFVDLFLQELKAVDSEVKQILPEGLLRKHQRSDSNGSTNSSRSNALLDDKMSRSNTQ
KARSQLLETHLAKLFKQKVEIFTKVEYTQESVETTIVKLCLKSLQEYVRLQTFNRSGFQQ
IQLDIHFLRTLLKENIEAEEAIDFLLDEVIVAASERCLDPIPLEPPILDKLVQVKLAKSK
GT
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaccgagcaaaaatggcgaccgatgatattccattggatgacaaggccaagaga
atgagagatctattgtcaagcttctactatccatatcatggttcatctcccaaagctcat
tcaaattacgaaaacttggattccatcaattccgcatctttcgatcctgagcactacatg
aaccttctcgtacaaaagtcgaatttggaagagcttcttcggaagcatgttgaaatggca
gccgaaatcaagaaccttgatactgatttgcaaatgttggtttatgagaattacaacaag
tttattagtgccacggatgcaattaaatggatgaaaagtaatattgtaggcatggaagca
aatatggagcaacttcttgataagataatgtcagtgcaatctagaagtgatagggtcaac
acttctctttttgagaaaagagaacacattgagaagttgcaccgaacaaggaaccttctg
cgtaaagttcagttcatttatgatctacccgctagacttgcaaagtgcatcaagtcagaa
gcatatgctgatgcagtcaaattctacattggagctatgccaatttttaaggcatatgga
gattcatctttccaggactgtaaaggagcatctgaagatgcaattattataatattaaaa
aacttgcagggaaagctattctcagattctgaatccattcaagctagagctgaagctgca
gtgcttttgaagcaattagattttccggtggatagcttacaggcaaaactccttgaaaag
ttagagcgatctcttggagaccttcaattgaaaacaaatgaaattgtgaatgttttacga
gaacctaatgatccttctaaacaaggaaaaggttttgactcgattcctggtataggtcat
gaggtctctgtccatggatttgcggaggctattcgtgcttatcgagtaatatttccggat
tctgaaagtcaattaattaaacttgcacaaaacttggtcatcaagcactttgaaataact
gagcaacgtgtaaagagacgaatttcttctaccaatttccttggtgctcttcgggctata
tgggatgatgtgcttctgatggatggagtcttaagtgaggctgcgctatctaatttttct
ttggaggttgctcatgcaactgttaaaaagtatgttgccagcacatttacttaccttctg
caagacatatcagatgctctcttgaaagtaaaggttagcccaaaagaggcagcagaggaa
catcccttacaggttgctttggaggctagcaaaaacacagtactccaaggcagcatggat
gtcttactggattttcgccaacttcttgacgatgagttagggctgctagttaaactgaga
gctttcataattgattgggttcaagaaggatttcaggactttttcaagtctcttgatggt
tgttttctcttgctttctggaagaaagaattcatcaagtcaagatcaaggattttcagaa
ggagcacttggtgaaaaagttcttgctggtcttgtcttggtcctagctcaactttttgta
ttcattgaacaaactgccatcccaagaatttctgaggaaatagctgtctccttctctagt
ggtggtgcacgaggccacgaaaatgggcatgtttttgtttcgggggagatatgtcaacta
tttcagttaggtggtgaaaagcttttgcatcattacataaatataagaactcgaagagta
tctactttgctaagaaagaggtttacaacaccaaactgggtcaagcacaaggagcctaga
gaagttcatatgtttgttgatttatttctacaagagttgaaagcagtagatagtgaggtg
aaacagattttacctgaagggctattgcgtaagcatcaacggtctgacagcaatggaagc
accaactcatcacgtagcaacgcattactagatgataaaatgagtaggtcaaatacccaa
aaagccaggagtcagctattagaaacacatctagcaaaattgtttaagcaaaaagtagaa
atttttacaaaagttgaatatacacaggagtcagttgaaacaactatagtgaaactttgc
cttaaaagtttgcaagaatatgtcagactccaaacctttaatcgaagtggtttccagcaa
attcagctggatattcatttcttaaggactcttttgaaggagaatattgaagctgaagaa
gcgattgattttttacttgacgaggtaattgttgctgcttcagagcgttgtttggaccca
attcctttagagcctccaattctggacaaacttgtacaagtaaagttagcaaaatcgaaa
ggaacataa
DBGET
integrated database retrieval system
