Gossypium hirsutum (upland cotton): 107911043
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Entry
107911043 CDS
T04793
Name
(RefSeq) lariat debranching enzyme-like isoform X1
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107911043
03009 Ribosome biogenesis [BR:
ghi03009
]
107911043
Spliceosome [BR:
ghi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107911043
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
90S particles
RNase
107911043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Metallophos_3
Motif
Other DBs
NCBI-GeneID:
107911043
NCBI-ProteinID:
XP_040962339
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All DBs
Position
D11:19664602..19671154
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AA seq
474 aa
AA seq
DB search
MVAAPLKLLLGLENEGFSFVDVGHSYQPKARKNSKTLYCDSLYRFCFWDFWTPLLNQYCV
QFKRMKIAVEGCMHGDLDKVYDTIKYIENTRNIKIDLLLCCGDFQAVRNEKDMDSLNVPP
KYREMKSFWKYYSGQEVAPVPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFG
NIRIGGLSGIYNARNYCLGHHERPPYNDNTIRSVYHVREYDVHKLMHLEDPIDIFLSHDW
PLGITDFGNWQQLVRYKKHFKDEIQQGTLGSKPAAQLLEKLKPSYWFSAHLHCKFTALVE
HEEGGRVTKFLALDKCLPGRKFLQIVDIESDPGPYEVQYDEEWLAITRKLNCVFPLTLRR
GDFGRTQLDMQDCRQWVKSRMEDRGAKPCEFSQTAPPHKPSDSVSNTTFSGSPRNPQTVS
FLELLDLPYVLDNALDSRDTPTSLPQKDDYSEDIPIEDEDDLEDGEPNNENRSS
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggttgcggcgccgctgaaactgctactagggttagaaaacgaaggtttctcttttgtg
gacgtcggccattcatatcaacccaaggcccgaaagaattcaaagacactatattgtgat
tctctctaccgtttctgtttttgggatttttggactcccttgcttaatcagtattgtgtc
caattcaaaaggatgaagatagcagtggaagggtgcatgcatggagatctcgacaaggtc
tacgacaccattaaatacatcgaaaacactcgcaacatcaaaatcgacctcctcctttgt
tgtggtgatttccaggcagtcaggaatgaaaaagatatggatagccttaatgtgccccca
aaatatagggagatgaaatcattctggaaatactattcgggtcaggaggttgccccagtt
cccaccatttttatcggtggaaatcatgaagcttccaattatttatgggaattgtattat
gggggatgggcagcacctaatatatacttcttggggtttgctggggttgtgaagtttggc
aatatccgtatcggtggactttccggaatttacaatgcgcgtaattattgtttaggacac
cacgaaaggccaccttataatgacaatactatcagatctgtgtatcatgtccgggagtac
gatgttcacaagctcatgcacctagaggacccgattgatattttcctttcacacgattgg
ccgctcggcatcactgattttgggaactggcaacaacttgttcgctacaaaaaacatttc
aaagatgagatccagcaaggaactcttggaagcaagcctgctgcacagctgctcgaaaaa
ctcaaaccatcgtattggttttcagctcacttgcactgcaaattcactgctcttgttgaa
catgaagagggtggtcgagtgacaaaatttcttgcactcgataaatgccttccagggcgc
aagttcttgcagattgttgatattgaatctgatccaggaccttatgaggttcagtacgat
gaagaatggctggcaataacacggaaattgaattgtgtctttcctttgaccctccgacgt
ggagactttgggagaacacagctcgacatgcaagattgtcgtcaatgggttaagagcagg
atggaagacagaggagccaaaccttgcgaattttctcaaacagctccacctcacaaaccc
tctgattcagtttcaaacactactttttctggttctccccgtaatcctcagactgtatct
ttcttggaattgctagatcttccttatgttcttgataatgcattggactccagggatact
cctacttcattgcctcaaaaggatgattacagcgaagacattcccattgaagacgaggat
gatctagaagatggagaaccgaataatgaaaaccggtcctcatga
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