Gossypium hirsutum (upland cotton): 107911158
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Entry
107911158 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase ZNF598
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107911158
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107911158
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107911158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
zf-C3HC4_3
Med3
Motif
Other DBs
NCBI-GeneID:
107911158
NCBI-ProteinID:
XP_016694535
UniProt:
A0A1U8JW89
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All DBs
Position
D12:complement(43107881..43111857)
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AA seq
856 aa
AA seq
DB search
MDDSCAVCADNLEWVSYGACGHRDVCSTCVSRLRFICNDRRCCICKTESNVIFVTKALGD
YTRMINDFSVLPSDVREGRVGSYWYHEDTQAFFDDVDHYRMIKAMCRLSCSVCDKMDEQS
NDGAKRRGKFRNIEQLKGHLFHKHRLVMCSLCLEGRKVFICEQKLYTRAQLHQHINTGDS
EVDGTESERGGFMGHPMCEFCKTPFYGDNELYSHMSTEHYTCHICQRQHPGQYEYYKNYD
DLEIHFRRDHYLCEDEACLAKKFIVFQSEAELKRHNTIEHGGRMSRAQRSAALQIPTSFR
YRRSNEENRRGRGRTFRREASDNDYQLSMAIEASLGMASDPPASSTAQAVSNHRDTNDID
PLVQPFESLSTTDAESSSRYLQALGTGSRGGPLQESSFPPLPVAPSTCQQKSQHSSGLPN
NTMAAYLRRQKNGNKNALSSAQAWPATSLRTGQASSISSQVRPVANVAAVTSLGNGSGNG
NRVAQLGYASSTQAQAQAQAQAQAQAQAQAQAQAQAQARPTTADILMSSGSRTSSGSTSR
ISHSSSAPNLSDGGYSEPSASDFPPVSAAQRHKQSSSSQVLTNVEDVRTANKSLVEKMRA
ALDYDEEKYTAFKEVSGQYRQGLIGTDRYLDYVHQHGLSHLVLELARLLPDVQKQKELID
TYNASLQSNGLQENGGGAQGSVLWKEKDASKKGKGKGKSVDTAGSNSKDVLADSILSTVR
QLQSSYKPTEEIMEVLSKDGYRRSKGKAKVMVEEQLVQLNSSNQPSIRIGCQNESLPVKA
GSGDGGGGSKQRKKTSKFHRVRLGDGSMASLLDLKNSEPDPEPEPLDNKFDSSQNSTGAL
PVRGVWKKGGSKKLFL
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagctgtgcggtttgtgctgacaatttggaatgggtttcctatggcgcctgt
ggtcatcgggacgtctgctccacgtgcgtctctcgtctccgattcatctgcaacgatcga
cgctgctgcatctgtaaaactgaatccaacgtcatcttcgtcactaaggctttaggggat
tatacgaggatgataaatgacttctctgtattgccatctgatgtaagagaaggacgggtg
ggttcttattggtaccatgaggatacacaggcctttttcgatgatgttgatcactacagg
atgatcaaggcaatgtgcaggctttcgtgcagtgtatgtgacaagatggatgagcagtcc
aatgatggggcgaagcggcgagggaagtttaggaacattgaacagctgaaaggtcatttg
tttcataaacatagattggttatgtgcagcctgtgtttggagggtcgaaaggtgtttatt
tgtgaacaaaagctatatactagagcacagttacatcaacatataaacacaggtgactct
gaggtggacggaactgagagtgagagaggtggcttcatggggcatcctatgtgtgaattc
tgcaagaccccattttatggggataatgaattatattcacacatgtccacggagcactat
acatgtcatatatgccaaaggcagcatccaggacaatatgaatattacaagaattatgat
gaccttgagattcattttcgccgagatcattacctatgtgaggatgaggcttgccttgcc
aaaaagttcatcgtcttccagtctgaagctgaactaaagagacataataccattgaacat
ggaggtcgcatgtctcgagcacaacgtagtgctgctttacaaattccaacaagctttcgg
tatcgtcgaagtaatgaagaaaatcgccgtggaaggggacgaacatttcggcgcgaggct
tctgataatgactatcaactttcaatggccattgaggcaagtttgggaatggccagtgat
cctccagcatcatctacagcacaggcagtctctaatcatagagacacaaatgatatcgat
ccgcttgttcagccttttgagtcattatctacaacagatgccgaatcatcttctagatat
cttcaagctttggggacaggttcaaggggtggacctttgcaagaatcttcttttcctcct
ctccctgtggctcccagcacctgtcaacagaagtcccaacatagctcaggtttaccgaat
aacaccatggcagcttatctacggagacagaagaatgggaataaaaatgctttgagttca
gctcaagcttggccagcaacaagtcttaggactgggcaagcatcaagtatttcaagtcag
gttagaccagtagcaaatgttgcagctgtaacatcgcttggtaatggtagtggtaatggt
aacagggttgcacagttgggctatgcaagctcgactcaggctcaggctcaggctcaggct
caggctcaggctcaggctcaggctcaggctcaggctcaggctcaggctcaggctcgaccc
acaacagcagatatattgatgtcatctggttctcgaacaagctcaggcagcacaagtagg
attagccattcttcatcagctccaaatctcagtgatgggggatactcagaaccatctgct
tctgattttcctcctgtttctgctgcacaaaggcacaagcaatcctcaagcagccaggtg
ctgacaaatgtggaagatgttcgtacggccaacaaatctttggtggaaaagatgcgagct
gctcttgattatgatgaagaaaaatatactgcttttaaagaagtatctggacagtatcgt
cagggcttaataggcacagatagatatttggattatgtacatcagcatggcttgtcacat
ctagttcttgagctggctagactcttgcctgatgttcagaagcagaaagagctaattgac
acctacaatgctagtttacaaagcaatggtctgcaagagaatggtggtggggcccagggc
agtgtgttgtggaaggagaaggatgcctctaagaaagggaaaggaaaagggaaatctgtt
gatactgctggcagtaattcaaaggatgttctggccgatagtattctcagcactgtccgc
caattgcagtcaagttataagcctactgaagaaattatggaagtgctatcaaaggatggt
taccgtcgttccaaaggtaaagcaaaggtgatggtggaggagcagctggtgcaactcaat
tcaagcaatcagccatcaataagaattgggtgccaaaatgagtccttaccagtgaaagct
ggatcaggggatgggggtggtggtagcaagcagcgaaaaaaaacctcaaagttccaccga
gttcggcttggtgatggttcaatggcatcactactggatctcaaaaattctgagccagac
cctgaacctgaaccattagataacaagtttgatagtagccaaaactcaactggagcactg
cctgtacggggggtatggaagaagggaggaagtaaaaagctctttttataa
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