Gossypium hirsutum (upland cotton): 107911258
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Entry
107911258 CDS
T04793
Name
(RefSeq) vesicle transport v-SNARE 11-like
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107911258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107911258
Membrane trafficking [BR:
ghi04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
107911258
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
ETRAMP
PLU-1
Pox_EPC_I2-L1
DUF7260
Exo84_C
Motif
Other DBs
NCBI-GeneID:
107911258
NCBI-ProteinID:
XP_016694620
UniProt:
A0A1U8JWJ6
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Position
D11:2908936..2912033
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AA seq
221 aa
AA seq
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MSEVFEGYERQYCELSDNLTRSCTSASVLHGELKKQKLSEIKEGLDEADALIRKMDLEAR
SLQPSIKATLLAKLREYKHYLNNLKTDVKRITSTDTNQAARDELLESGIDGTMTVSADQK
GRLLMSTERLNQSTDRIKESRRTMLETEELGVSILQDLHQQRQSLLHAHSTLHAVDDNIS
KSKKILTTISRRINKNKLILSSIIGALILAILIILYIKLVG
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggtgttcgaaggttatgaacgccaatactgcgagctctccgacaatttgacc
cgcagctgcacctccgccagcgttcttcatggagagctgaagaagcagaaactttctgaa
ataaaagagggactggatgaagctgatgctttgattcggaaaatggaccttgaagcaagg
agtttgcagccaagcataaaggccacacttcttgctaaattaagggaatataaacattat
ctgaacaacttgaagactgatgttaaaagaattacttcaaccgatacaaatcaggccgcc
cgagacgagttgttggagtcaggaatcgatggaacaatgacggtctctgctgatcaaaaa
ggcagattattgatgtcaacagagagattaaaccagtctactgatagaattaaggaaagc
agaagaacaatgctggaaactgaagagcttggtgtttcaatcctacaggatttgcatcaa
caacgccaatctctccttcatgcgcatagcacgctccatgcagtagatgacaacattagc
aagagcaagaagatcctgacaaccatatcaagaaggattaacaagaacaaattgatattg
agttcaataatcggagctctaattcttgccatattaattatcctatatattaagctcgtg
ggttag
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