Gossypium hirsutum (upland cotton): 107911567
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Entry
107911567 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107911567
KO
K19022
AP-5 complex subunit beta-1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107911567
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
107911567
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
107911567
NCBI-ProteinID:
XP_016694899
UniProt:
A0A1U8K2U9
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Position
A04:88756348..88761359
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AA seq
1115 aa
AA seq
DB search
MAEIPPPKPILPQDWESLVEDFQYGGFRREKWRSLSPSVVELALSSILKKEFPFKIPLVI
FLEEFSDLLFPQDPSLASLMDRLVETLRAVVQSPTDGVHVTYALKEQMMVSTTSILISTN
SVESVEVRFTESVVELLLAVINRPNHGPDRHARATACECLRELEKAYPCLLSDIAGHLWS
LCQSERTHASQSYILLFTTVIHSIVNRKLSVSILNTSVPLISFNVPQCVVELEKEGLLEL
NYKELRRAMAFLLEWPQVLTPCGMMIFMGMIMPLAVALDLQPSMLKVQFFGMIYSFNPLL
YHVVLVMYSHFSEAFNEQEIEIVRRLYLVSLETQQHLVFRLLSVHWLMVFLNRLMVEKKK
SIVETGFMFYPSVFDPLSLKALKLDLLAFCSVCIDKLNPQSVSDMEGNSVVKLFQDGLVS
VLGFKWLPPWSTETAVAFRTFHKFLIGASSHSEADPSTTTALMESAIFNHLKGMFVDLIL
EFQRLVPVIVAFIDRLLGCQRHLWLGERLLQTIDASLHSRVAIDYRLVSYFPIFDRIAEN
QTIPPRRLLELLTKFMAFLVEKHGPDTGVKSWSRGSKVLGICRTMLTHHQSSRLFLGLSR
LLAFTCLYFPDLEVRDHARIYLRMLICVPGVKLRGMLNLGEQLLGISPSSHSGSFFNVPS
PRHSQDPKKLKNIASYIHLERMIPLLVKQAWSLSLLPLRVGSNKPDFSGGFRDGGASTDE
RELDATIQFETVLDGQVMDKPQAPLYVMDSKVSEILAILRRHFTYIPDFRHMPGLRVKIP
CYLRFDAESFNNVWGSESPKSGLHGVDALPAIYATVLKFSSLAPYGSIPTCHIPFLLGQP
PTSGDFRGENFSLDIIATHDGDGGSEEDIYKAPAMIELEPREPTPGMVDVFIETNGEDGQ
IITGQLQSITVGIEDLFLKAIAPPDIPEDVLPDYYSDLFNALWDACGTTSNTGREIFPLK
SGKGFAAIHGTRSVKLLEIPPYALIRATEHYLAPFVVSVSGDRLIDMVKDNGIIRDVVWQ
DEASGLLLEAPTSVAEPDSMPLYLTLVENEEEQESQLNIGKRSLGCIHVLIFLPPMFHLL
LQMEVSDASTLVRIRTDHWPCLAYIDDYLEALFLS
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaataccaccgccaaaaccgattttacctcaagattgggaatctttagttgaa
gatttccagtacggcggtttccgccgcgagaaatggcggtccctgtccccttccgtcgtc
gaactcgccctttcatcgatcctcaaaaaggaattccctttcaaaatccctctcgtaatc
ttcctcgaggaattttccgatctattgttcccccaagatccatcactcgcttcccttatg
gaccgcctcgtcgaaaccctacgcgccgttgtccaatccccgaccgacggtgtccatgtc
acttacgcattgaaagaacagatgatggtttcgacgacctcgattttgatctctaccaac
tcagtcgagtccgtcgaggttcggtttacggaatccgtcgtcgaacttttattagcggtt
ataaaccggccgaaccatggaccggaccgccacgcacgtgccactgcttgtgagtgtcta
cgtgagttggagaaagcttacccttgtttactctctgatattgctggtcatttatggagc
ttatgccaaagcgaacgaacccatgcttcgcaaagttacattttgttgtttacaactgtg
attcatagtatcgtgaatcgaaagttaagtgtttctattttgaatacttcggttcctttg
atttcttttaatgtaccgcaatgcgttgtagaattagaaaaggaagggctgttagagttg
aattataaggaattgagaagagcaatggcgtttttattggaatggccacaagttttaact
ccttgtgggatgatgatttttatgggaatgataatgccattagcagtagctttagattta
cagccttctatgcttaaagttcagttttttgggatgatttattcatttaatcctttattg
tatcatgttgttttggtcatgtattcgcatttttccgaagcatttaacgagcaggaaatt
gagattgtgagaagactttatttggtttcattggaaacacagcaacatttggtgtttcga
ttgctttcagtgcattggttgatggtttttctgaataggttgatggtcgagaagaagaag
tcgattgtagaaacgggtttcatgttttatccgagcgtgtttgatccactttcgttgaaa
gcattaaagctagatttacttgctttctgttctgtttgtatcgataagttgaatcctcaa
agtgtttcagatatggaagggaattcggtagtgaagctctttcaggatggtctagtatca
gttttgggtttcaaatggttgcctccttggagcacggaaactgcagtggcattccgtact
ttccataaatttttgataggcgcatcatctcattccgaggctgatccttccaccaccact
gcacttatggaatccgccattttcaatcatttaaaggggatgtttgttgacttgatactg
gagtttcagagattggttccagtcattgttgcttttattgaccgtttgttaggctgtcaa
aggcatctttggttgggagaacgtctgcttcaaacgatcgatgcgagtctgcattcaaga
gttgcaattgattatagactagtttcatacttcccgattttcgataggattgctgaaaat
caaacaatacctccgcgtaggttgttagagctactaaccaagttcatggctttccttgtt
gagaaacatggaccagacacaggtgtaaaatcttggtctcggggtagtaaggtcctcggc
atttgcagaaccatgctaactcaccatcagagctctcgtttattccttggtttatcccgt
ctcctggcgttcacctgcctttacttccctgatttggaggttcgtgaccacgcaaggatc
tacttgaggatgctgatttgtgtacccggagtgaagcttagaggaatgctaaaccttggg
gagcaactccttggtatttccccctcgtctcattccggatcattcttcaacgtgccatct
cctcgacattctcaagatcccaagaaattaaagaacatcgcatcctatatccatctcgag
cggatgataccactacttgtcaaacaggcttggtcgttgtctttattacctttaagggtc
gggagtaacaaaccagatttttctggtggctttagggatggtggagcctcgacagatgaa
agagaacttgatgccactatacaatttgagactgtattagatggtcaggtaatggataaa
ccacaggcgccattatatgtgatggactcgaaagtttcagagattttagcgatattaagg
agacatttcacgtatattcctgattttagacatatgccggggcttagggttaaaattcct
tgctatttgagatttgatgcggagtctttcaataatgtttggggaagtgagtccccgaaa
agtgggttacacggagtagatgccctccctgccatatatgctacagtattgaaattctca
tcgttggcaccatatgggtcaattccgacatgtcatataccctttcttctcggtcaacct
ccaactagtggtgattttcgtggtgaaaatttttcactagacatcattgctacacacgat
ggtgatggtggtagtgaagaagatatctataaagctcctgcaatgatcgaattggaacca
cgtgagccaactcccggtatggttgatgttttcattgaaacaaacggggaagatggtcaa
atcatcacaggacagttgcaaagtattacggttggcattgaagatttgtttcttaaagct
attgccccaccagacatcccagaagatgttttacctgattactattcagatttgttcaat
gccttgtgggatgcatgtggtactacttccaataccgggcgggagattttccccttaaag
agtggcaaagggtttgccgccattcatggaaccagatccgtgaagttgcttgagattcct
ccatatgctttaattcgtgccactgaacattatctggcaccatttgtagttagcgtgagc
ggagatcgtctcattgacatggtaaaggataatggaattatcagagacgttgtatggcaa
gatgaagcctctggacttttgcttgaagcccccacctcagttgccgaacctgacagtatg
cctctttatcttactttagtcgagaacgaagaagagcaggaaagtcagttaaacattggc
aaaagaagtctcggttgcatccatgtcttgatttttcttcccccgatgttccatctcttg
ttacaaatggaagtaagtgatgcttcgactttagttcgtattcgcaccgatcattggcca
tgcttagcttacatcgatgattacttggaggcattgtttttgtcataa
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