Gossypium hirsutum (upland cotton): 107911773
Help
Entry
107911773 CDS
T04793
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107911773
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107911773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
MIOS_WD40
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_SCAP
WD_LRWD1
Beta-prop_IFT140_1st
Beta-prop_IP5PC_F
NBCH_WD40
Beta-prop_BBS7
Beta-prop_Nup120_160
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
107911773
NCBI-ProteinID:
XP_016695185
UniProt:
A0A1U8JY56
LinkDB
All DBs
Position
D11:5970687..5976085
Genome browser
AA seq
511 aa
AA seq
DB search
MRTDSSTFQYFFHSIRSRELSTFRVRKRAWIDELASDFTEIGAIENNVLETPPLAVSFCK
ASKNSHIFAVSDEAGYVNLFDSRRELSSAASYHENAEKARIDDWLAHHNAIFDVCWIKED
THILTASGDQTIKVWDAQDKKCAGVLMGHTGSVKCLSSHPTNSDLVLSGSRDGSFAIWDL
RCKSNSKSRCDEVCHPSTSMVKGAHLSSQARRGRRGKAAAASITSVIYLKDEISIATSGA
ADSVVKFWDTRNLKSNVTQACPHPESSTQKGISSLSQDLKGVFLTASCMDNRIYLYNVLQ
LDKGPIHTFSGCQIESFYVNAAISPDGDHVLSGSSDGDAYIWKVNKPLAEPIILKSHKGE
VTAVDWCPSEIGKIATCSDDFTVRLWNIEPRYCSSTRLPSSVRRRVMAVPSAESSKLLVN
ETVEPMDQIKQPGTGSSYSSDEAPQIYSSSPATASLLRTPEAQKKKFPSSSDSNETFEKT
PEASMRSPTSVLNPPSSLKRKTIRDYFLAIQ
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaccgattcgtcaactttccaatattttttccacagtatcagatccagagaactc
agtacctttcgagttagaaaacgagcatggattgacgaattagcttcggattttactgaa
atcggagcgattgaaaacaatgttttagaaacgcctcctttggccgtctccttttgtaag
gcaagtaaaaattcccatattttcgctgtatctgatgaggctggatatgtaaacctgttt
gattctcggcgggagctttcttctgctgcatcttatcatgaaaatgcagaaaaagcaaga
atcgatgattggctagcacatcacaacgccatatttgatgtatgttggatcaaggaagat
acccacattttaacagcttcaggggatcaaactataaaggtatgggatgctcaggataag
aaatgcgcaggagtgttgatggggcatacgggaagtgttaaatgtttgagttctcatcca
accaattctgatcttgttctctctgggtcgagagatgggtcctttgccatttgggatcta
agatgcaagagtaactcgaaaagtagatgtgatgaagtatgccatccatcaacttccatg
gtgaaaggagctcatctttcatctcaagcaaggcgggggaggcgtggcaaggctgctgct
gccagcattacatcagttatttatctcaaagatgagatttccattgccacatctggagca
gcagacagtgttgtgaagttctgggataccagaaatctgaaatctaatgttactcaggca
tgtccacatccagagtcttcaactcaaaagggtatatctagcttgtcccaggatttgaaa
ggagtatttctcacagcatcttgcatggataacaggatatatttgtataatgtacttcag
cttgataagggcccgattcacactttctctggatgccaaatagaatctttttatgtaaac
gctgcaatcagtccagatggggatcatgtattaagtggttcaagtgatggagatgcttac
atatggaaggtaaacaagcctctagcggagcctatcatcttgaaaagtcataaaggagaa
gttacggcagtagattggtgcccatctgaaattgggaagatagcaacctgttcagatgat
ttcacggttcgactatggaacattgaacccagatactgctcaagcacaagattgccatct
tctgtccgaagaagagtaatggcagttccaagcgcagaaagtagtaagctattggtgaat
gagactgtagaaccaatggatcaaataaagcaacctggtactggtagttcatattcttca
gatgaagcaccccaaatttactcatcaagtcctgccactgcatctttacttagaactcct
gaagcccagaagaaaaagttcccatcaagttcagactcaaatgaaacctttgagaaaaca
cctgaagcctcaatgaggagtccgacttcagtgctgaatcctccttcctcgttgaaacgg
aagaccatccgcgattactttctagccattcaatga
DBGET
integrated database retrieval system