KEGG   Gossypium hirsutum (upland cotton): 107911773
Entry
107911773         CDS       T04793                                 
Name
(RefSeq) denticleless protein homolog
  KO
K11790  denticleless
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107911773
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     107911773
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_EML EIF3I Beta-prop_TEP1_C Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_EIPR1 MIOS_WD40 Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_SCAP WD_LRWD1 Beta-prop_IFT140_1st Beta-prop_IP5PC_F NBCH_WD40 Beta-prop_BBS7 Beta-prop_Nup120_160 WD40_RFWD3
Other DBs
NCBI-GeneID: 107911773
NCBI-ProteinID: XP_016695185
UniProt: A0A1U8JY56
LinkDB
Position
D11:5970687..5976085
AA seq 511 aa
MRTDSSTFQYFFHSIRSRELSTFRVRKRAWIDELASDFTEIGAIENNVLETPPLAVSFCK
ASKNSHIFAVSDEAGYVNLFDSRRELSSAASYHENAEKARIDDWLAHHNAIFDVCWIKED
THILTASGDQTIKVWDAQDKKCAGVLMGHTGSVKCLSSHPTNSDLVLSGSRDGSFAIWDL
RCKSNSKSRCDEVCHPSTSMVKGAHLSSQARRGRRGKAAAASITSVIYLKDEISIATSGA
ADSVVKFWDTRNLKSNVTQACPHPESSTQKGISSLSQDLKGVFLTASCMDNRIYLYNVLQ
LDKGPIHTFSGCQIESFYVNAAISPDGDHVLSGSSDGDAYIWKVNKPLAEPIILKSHKGE
VTAVDWCPSEIGKIATCSDDFTVRLWNIEPRYCSSTRLPSSVRRRVMAVPSAESSKLLVN
ETVEPMDQIKQPGTGSSYSSDEAPQIYSSSPATASLLRTPEAQKKKFPSSSDSNETFEKT
PEASMRSPTSVLNPPSSLKRKTIRDYFLAIQ
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgcgaaccgattcgtcaactttccaatattttttccacagtatcagatccagagaactc
agtacctttcgagttagaaaacgagcatggattgacgaattagcttcggattttactgaa
atcggagcgattgaaaacaatgttttagaaacgcctcctttggccgtctccttttgtaag
gcaagtaaaaattcccatattttcgctgtatctgatgaggctggatatgtaaacctgttt
gattctcggcgggagctttcttctgctgcatcttatcatgaaaatgcagaaaaagcaaga
atcgatgattggctagcacatcacaacgccatatttgatgtatgttggatcaaggaagat
acccacattttaacagcttcaggggatcaaactataaaggtatgggatgctcaggataag
aaatgcgcaggagtgttgatggggcatacgggaagtgttaaatgtttgagttctcatcca
accaattctgatcttgttctctctgggtcgagagatgggtcctttgccatttgggatcta
agatgcaagagtaactcgaaaagtagatgtgatgaagtatgccatccatcaacttccatg
gtgaaaggagctcatctttcatctcaagcaaggcgggggaggcgtggcaaggctgctgct
gccagcattacatcagttatttatctcaaagatgagatttccattgccacatctggagca
gcagacagtgttgtgaagttctgggataccagaaatctgaaatctaatgttactcaggca
tgtccacatccagagtcttcaactcaaaagggtatatctagcttgtcccaggatttgaaa
ggagtatttctcacagcatcttgcatggataacaggatatatttgtataatgtacttcag
cttgataagggcccgattcacactttctctggatgccaaatagaatctttttatgtaaac
gctgcaatcagtccagatggggatcatgtattaagtggttcaagtgatggagatgcttac
atatggaaggtaaacaagcctctagcggagcctatcatcttgaaaagtcataaaggagaa
gttacggcagtagattggtgcccatctgaaattgggaagatagcaacctgttcagatgat
ttcacggttcgactatggaacattgaacccagatactgctcaagcacaagattgccatct
tctgtccgaagaagagtaatggcagttccaagcgcagaaagtagtaagctattggtgaat
gagactgtagaaccaatggatcaaataaagcaacctggtactggtagttcatattcttca
gatgaagcaccccaaatttactcatcaagtcctgccactgcatctttacttagaactcct
gaagcccagaagaaaaagttcccatcaagttcagactcaaatgaaacctttgagaaaaca
cctgaagcctcaatgaggagtccgacttcagtgctgaatcctccttcctcgttgaaacgg
aagaccatccgcgattactttctagccattcaatga

DBGET integrated database retrieval system