KEGG   Gossypium hirsutum (upland cotton): 107911781
Entry
107911781         CDS       T04793                                 
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    107911781
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107911781
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     107911781
SSDB
Motif
Pfam: HD HD_assoc_2 GyrB_insert
Other DBs
NCBI-GeneID: 107911781
NCBI-ProteinID: XP_016695199
UniProt: A0A1U8K3L9
LinkDB
Position
D11:6073008..6078686
AA seq 471 aa
MGAYCDENLSFSPACNLSPSHDLRLSKHVHDNVHGNIYLDPLSLKFIDTEQFQRLRELKQ
LGLAHLVYPGAVHSRFEHSLGVYWLAGEAMQKLKTYQGLELGIDRFDVQAVKVAGLLHDV
GHGPFSHLFEREFLPKVLNSFKWAHEQMSADLIDHIVDVHHIDVESEMIKRVKEMVLASS
EFALPKSAKEKQFLYDIVANGRNGIDVDKFDYIVRDSRACGLGCSFDFHRLMETMRVLGD
EICYRAKDYLSIHKLFATRADLYRTVYTHSKVKAVELMIVDALLKANSYLEISSSIQDPS
EYWKLDDTIIKTIETAPDEELRESRDLILRIRRRNLYQFCNEYSVPKDQLEHFKDVTAQD
IACSQKNGGVLLQEDDIAVSNVRIDLTRGRQNPLESINFFKDYESQEKFPIPHERISHLL
PTSYQDMIVRVYSKKPELVAAVSEAFENFQLKIYGVKAQVHATPEKKKRRF
NT seq 1416 nt   +upstreamnt  +downstreamnt
atgggcgcttactgtgatgaaaatctctctttctctccggcttgtaatttgtctccttct
cacgacctccggctctccaaacacgtccacgacaacgttcacggcaacatttatctcgat
cctctctctttgaagtttattgacaccgagcaatttcaaaggctccgtgagctgaaacaa
cttggattggcacacctggtttatccaggggctgtacattccaggtttgagcattctctt
ggtgtgtattggcttgcgggtgaagctatgcaaaagctcaaaacttatcagggtttggag
cttggtattgatcgatttgatgttcaagcagtgaaagttgcaggacttctacatgatgta
ggccacggaccttttagccacttgtttgaacgggaatttctccccaaagttcttaatagc
ttcaaatgggctcatgaacaaatgtcagcagatctgattgatcatattgttgatgtgcac
catatcgatgttgaatctgagatgattaaaagagtcaaggaaatggtactagctagctct
gagtttgcactgccaaaaagtgcaaaggagaagcaattcttatatgatattgttgcaaat
ggtcggaatggaattgatgtggataagtttgattacattgtccgtgacagtcgagcttgt
ggcctaggatgcagctttgatttccacaggttgatggagactatgcgagttttgggtgat
gagatctgctatcgtgctaaagactatcttagcatccacaagttatttgctactcgtgct
gatctttatcgaactgtgtacacccactctaaagtgaaggctgttgagctaatgatagta
gatgctcttttaaaagctaatagttatctagaaatctcttcttccattcaggatccttct
gagtactggaagctagatgacacaataatcaaaactatcgagacagcaccagatgaagaa
ctccgagaatctagagatttgattctgcgcattcgtaggagaaatttgtatcagttctgt
aacgagtattcagttccaaaagaccaattggaacatttcaaagatgtcactgcacaagac
attgcttgttcccagaaaaatgggggagtactgctgcaagaagatgatattgctgttagc
aatgtcagaattgatttgactcgtggaaggcaaaatcctctagaaagcatcaactttttc
aaggattatgagagtcaggagaagttccccataccacatgaacgcatcagtcacttgctg
cccacatcttatcaggatatgatagtgagagtgtactcgaagaaacctgaattggtagca
gctgtctctgaggcattcgaaaattttcaactaaaaatctacggagttaaagctcaagtg
catgctacacctgagaagaagaaacggcgcttttaa

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