Gossypium hirsutum (upland cotton): 107911801
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Entry
107911801 CDS
T04793
Name
(RefSeq) FACT complex subunit SSRP1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107911801
03036 Chromosome and associated proteins [BR:
ghi03036
]
107911801
Transcription factors [BR:
ghi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
107911801
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
107911801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
Motif
Other DBs
NCBI-GeneID:
107911801
NCBI-ProteinID:
XP_016695223
UniProt:
A0A1U8K2M1
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Position
D11:6225929..6231383
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AA seq
647 aa
AA seq
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MTDGHLFNNISLGGRGGTNPGQLKIYSGGILWKKQGGGKAVEVDKSDILGVTWMKVPRTN
QLCVRIKDGLYYKFAGFRDQDVASLTNFFQNNCGITPEEKQLSVSGHNWGEVDLNGNMLT
FVTGSKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDLLMEISFHIPNANTQFV
GDENHPPAQVFREKIMSVADVGTGVEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKFNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVESTLSIN
EDLLNTKYKDRLEPSYKGLIHEVFTTIMRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
RNEYHNLFDFISSKGLKIMNLGDVRTADGVAEILQNDDDDAVDPHLERIKNEAGVDESDE
EDEDFVIDKDDGGSPTDDSGEEESDASESGNEKEKPAKKDQRKEAAVAAAASSSKESKKK
GRDGQDDGKKKKRKKKDPNAPKRAMTGFFYFSQAERENVKKSHPGIPFTEVSKILGDRWR
KLPKEEKEPYEVKARVDKKRYDDEKNEMKGNNNNPQPMNIDSGNESD
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggtcatctcttcaacaacatctcccttggcggtcgaggcggcacgaatcct
ggacagcttaaaatttattcaggaggtattctatggaagaaacaaggaggcggtaaagca
gtagaagttgacaaatctgatatcttaggggttacatggatgaaggtccctaggacaaat
caactttgtgttagaatcaaagatgggttgtactacaagttcgctggattccgtgaccag
gatgttgccagtttgaccaatttttttcagaataattgtggaataacaccagaagagaaa
cagctttctgtcagtggtcataactggggagaagtcgatttaaatgggaatatgcttacc
tttgtgactggttcaaagcaagcttttgaagtgtcattagctgatgtatcacaaactcag
cttcaagggaaaaacgatgtcatcttggagttccatgtggatgatacaactggagctaat
gagaaagatttgcttatggagataagtttccacatacccaacgccaacacccaatttgtt
ggtgatgaaaatcatcctcctgctcaggttttccgtgaaaaaatcatgtcagtggctgat
gttggtactggagttgaggaagctgttgtcacttttgagggcattgcaatcctcacacca
aggggtcggtatagtgttgaacttcatctgtcattcttgcgactgcaaggacaggctaat
gatttcaaaattcaatatagcagtgttgtgcgtctttttttgcttccgaagttcaaccag
cctcatacttttgttgttgttacactggatccgcctatccgtaaagggcaaactttgtac
ccacatattgtcttgcagtttgaaactgattatgttgttgaaagcaccttgtccataaat
gaggatcttttgaataccaagtacaaagacaggctggaaccatcttacaagggacttatt
catgaagtttttaccacaataatgcgtggtttatctggtgccaaagttaccaaaccagga
aaattccgtagctgtcaagatggttatgctgttaagtcttcattgaaagctgaagatgga
gtcctgtatccacttgaaaagagtttcttttttctacccaaacctcctacacttattctt
catgaagagattgactatgttgaatttgagaggcatgctgctggtggctcaaatatgcat
tactttgatcttcttataagattgaaaactgagcaagaacatttatttcggaatattcag
agaaatgaatatcacaatttgtttgacttcatcagttcgaagggtttgaagattatgaac
cttggagatgtacgaaccgcagatggtgtggctgagattcttcaaaacgatgatgatgat
gcagttgatccacatcttgaacgcattaagaatgaagctggtgtggatgaaagtgatgag
gaggatgaggactttgttattgacaaggacgacggaggttctccaactgatgattctggg
gaggaagaatctgatgctagtgaaagtggaaatgagaaagagaaacctgcgaaaaaggat
caaaggaaggaagctgctgttgctgcagctgcctcttcttctaaagaaagtaagaagaaa
ggtagagatggacaagatgatggaaagaagaagaaaaggaaaaagaaggatcctaatgca
ccaaagagggcaatgaccggcttcttctatttttcacaggcggaaagggagaatgtgaag
aaaagtcatccgggaataccatttacagaggtgtccaaaatacttggagataggtggaga
aagttgccaaaggaggagaaggaaccatatgaagtaaaggctagagttgataaaaagcga
tacgatgatgagaagaatgagatgaaaggcaataataacaatcctcaacctatgaacatt
gattctggaaatgaatccgactga
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