Gossypium hirsutum (upland cotton): 107911840
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Entry
107911840 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107911840 isoform X1
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00500
Starch and sucrose metabolism
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
107911840
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
107911840
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
AMT4_dom_C
BING4CT
Motif
Other DBs
NCBI-GeneID:
107911840
NCBI-ProteinID:
XP_016695280
UniProt:
A0A1U8JYF7
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Position
D11:6552691..6562190
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AA seq
1002 aa
AA seq
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MLVLRSLLICFFWKQLSGQCLLLLLLFFNYNAEESKMGVFVLPSSAFGVLLPHFPVVSLG
TPRGQFHLVLGGSSNRKRKNLLTGNWQCRPRIVVASNRDNSKDNVTDDEDGSLLGSYEML
EMKEDELVEARKALSEVKARQAALEKERDQLLEDFASSEAKQKEYVASVLHDKELAVSEL
ESTKSLFHQKLQESVKEKFALESKLVLARQDAVELAVQVEKLAEVAFRQATSHILEDAKL
RVSAAETLAAESAFQIDEQIRKSTEGTIFSIIVESKDAINKALDVAENAIDEATQAVAVF
TDAVNPIDVIASAQSENIKLQGAVSDLEAQLLVSKSELDRLKLELQQAQVQANAAELRSS
NAEKALLEFQELSRKKALEQEEEIRSLLEKIKKEAVERKKVLSKAFKAELESIKAAVDAS
KEITCSRENAYMRRCEALQRSLRTSESALKMWRQRAEMAQSLLLKERSEKEDDEDVIYIA
NGGRIDLLTDDDSQKWKLLSYGPRKEIPQWMARRIRSIRPKFPPRKTDISKALNSNFKSL
ELPKLDEVWSIAQEKLREGDMLTEHVIEKEVIEKKRKALERALQRKTVKWKRIREETKIE
PGTGTGREIVFQGFNWESWRRQWYQELAFKAADLSHSGITAVWLPPPTQSVAPQGYMPSD
LYNLNSSYGSVEDLKSCIEEMHSQELLALGDIVLNHRCAHKQSPNGVWNIFGGKLAWGPE
AIVCDDPNFQGRGNPSSGDIFHAAPNVDHSQHFVRKDVKEWLYWLRNDIGYDGWRLDFVR
GFSGTFVKEYIEASNPAFAIGEYWDSMAYEHGNLCYNQDAHRQRIVNWINATGGTSSAFD
VTTKGILHSALHDQYWRLIDPQGKPTGVMGWWPSRACTFLENHDTGSTQGHWPFPRDKLT
QGYAYILTHPGTPVIFYDHFYEFGIRDVLTELIEARRRAGIHCRSSVKIYHANTEGYVAQ
VSNMLVIKLGHFDWNPSKENQLDGSWQKFIDKGADYQIWLRQ
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcttgagatctttattgatttgttttttctggaagcaattatcagggcaatgt
cttcttcttcttcttcttttttttaattataacgcagaagaaagcaaaatgggtgttttt
gtattaccaagttcagcctttggggtgcttcttccccacttccctgttgtttcattaggc
acgccacgtgggcagtttcatttagtcttgggaggctcttctaacaggaaaaggaagaat
ttacttactggaaactggcagtgcagaccaagaatagttgttgcctcaaatagggataat
tccaaagacaatgtcacagatgatgaggatggttctttgttggggagttatgaaatgttg
gagatgaaagaagatgagttagtggaggcgagaaaggctctttctgaggttaaggccaga
caagcagcccttgaaaaagaaagagatcaattgcttgaagactttgctagttctgaggct
aaacagaaggaatatgtggcttccgttttacatgacaaagaactggctgtttcagaactg
gagtcgaccaaatctctgttccatcagaagctacaggagtcagtgaaagagaaatttgcg
ttggaatctaagttggttcttgcaagacaagatgctgttgaacttgcagtacaagttgaa
aagttagcggaggttgctttccgacaggccacatctcacatattagaagatgccaagctg
agggtttcagctgcagaaaccttggctgctgagtctgcttttcaaattgacgaacagata
agaaaatcaaccgaaggtactatattctcaattatagtggagtctaaagatgctataaat
aaggcccttgatgtggcagaaaatgccattgatgaggctacacaagctgtagcagtattc
actgacgctgtaaatcccattgatgttattgcttctgctcagtctgagaatattaagtta
caaggtgctgtcagtgatttagaagctcaactattggtttcaaagagtgagcttgatagg
ttgaaactggagttgcaacaggcccaagtacaagcaaatgcagctgaactccgatccagt
aatgctgagaaggcattgcttgaattccaagagttgagtaggaaaaaggctcttgagcag
gaagaggagattaggtctttattggagaaaataaagaaagaagcagttgaaagaaagaag
gttttgtccaaggcttttaaggctgagttggaaagcatcaaggctgctgttgatgcttcc
aaagaaataacatgttcaagagaaaatgcctacatgagaagatgtgaagccctgcagagg
tcactgaggacatctgagagtgctttaaagatgtggagacagagagcagagatggcacag
tcattgttgttgaaggaaagatcagaaaaggaagatgatgaagacgtcatctatatagct
aatggtgggaggatagaccttttgactgatgatgattcacagaaatggaaacttctgagt
tatggtccacgtaaggagatacctcagtggatggcaagaaggattaggagcatccgtcca
aagtttcctcctagaaagactgacatatctaaagccttaaattccaattttaaatcgttg
gaattgcccaaacttgatgaggtttggtctattgctcaagaaaagctaagagaaggtgat
atgctgactgaacatgttattgaaaaagaagtaatagagaagaaacggaaagctttggag
cgagcactccagcgaaagacagttaaatggaagaggattcgagaagaaacaaaaatagag
ccaggaactggaacaggacgagaaattgtgttccaaggtttcaattgggaaagttggaga
aggcaatggtaccaggagctagctttcaaggcagctgatttatctcattctgggataaca
gcagtatggctcccaccaccaacacaatctgttgcaccccaaggttatatgccttctgat
ctttacaacttgaactcctcatatggatctgtcgaagacctgaaatcttgtatagaggaa
atgcattctcaggaacttctggcattgggagatattgtgcttaaccatagatgcgcgcat
aagcagagtccaaatggtgtctggaatattttcggcggcaaacttgcatgggggcctgaa
gctattgtttgtgatgatccaaatttccagggccgtgggaatccttcaagtggtgatatc
ttccatgcggcaccaaatgttgatcattcgcagcactttgtgcgaaaagatgtaaaggaa
tggttatactggctccgtaatgatattggttatgatgggtggcggcttgactttgtgaga
ggcttctctggaacctttgtgaaagaatatatagaagcttcaaatcctgcatttgctata
ggagaatattgggacagtatggcttatgaacatggtaacttatgttacaatcaagatgct
caccggcaacggatagtaaactggatcaatgccactggtggtacttcctcagcttttgat
gtcacgacaaaggggatactccactctgctttacatgatcaatactggagactgatagat
cctcaaggaaaaccaacaggagtaatgggatggtggccttcacgcgcatgtacgttttta
gagaaccatgatacgggatctacccagggtcactggccttttccccgtgataagcttaca
caaggatatgcttacatcttgacgcatccgggaactcctgtgatattttatgaccacttc
tatgaatttggcatccgtgatgtcttgacggaattaatagaagctcgaagacgggctggg
atccactgccgaagttctgtcaagatataccacgccaataccgaaggttatgttgctcag
gtcagcaatatgctagtgatcaagctagggcatttcgattggaatccttcaaaggaaaat
cagttggatgggagttggcaaaagttcattgataaaggagcagattatcaaatttggtta
agacagtaa
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