KEGG   Gossypium hirsutum (upland cotton): 107912059
Entry
107912059         CDS       T04793                                 
Name
(RefSeq) calnexin homolog isoform X1
  KO
K08054  calnexin
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04141  Protein processing in endoplasmic reticulum
ghi04145  Phagosome
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107912059
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    107912059
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:ghi03110]
    107912059
   04131 Membrane trafficking [BR:ghi04131]
    107912059
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:ghi04091]
    107912059
Chaperones and folding catalysts [BR:ghi03110]
 Other chaperones and cochaperones
  Calnexin / calreticulin
   107912059
Membrane trafficking [BR:ghi04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Others
    107912059
 Autophagy
  ER-phagy
   Other ER-phagy associated proteins
    107912059
Lectins [BR:ghi04091]
 L-type lectins
  107912059
SSDB
Motif
Pfam: Calreticulin DUF1634 OATP DUF4834
Other DBs
NCBI-GeneID: 107912059
NCBI-ProteinID: XP_016695589
UniProt: A0A1U8K4P8
LinkDB
Position
D11:3482305..3485089
AA seq 541 aa
MIMMGHFALLVFLAFASMQLLCIAADHDAAIFYDSFEEPFNGRWIVSDKDDYKGIWEHSK
SEGHDDYGLLVTEKARKYAIVKELEEPVNLRDGTTVLQYEARFQNGLECGGAYLKYLRPQ
EAGWKPKEFDNGSPYSIMFGPDICGLTNKVHFILKQKNPKSGEYVEHHLIDPPRVPSDKL
SHVYTAILKPDNEISILIDGEVKKKGNFLSAQDFDPPIIPAKTIPDPNEKKPEDWDDRVR
IPDPNAVKPDDWDENAPMEIEDMEAVKPEGWLDDESEEIDDPEATKPEDWDDEEDGVWEA
PKIDNPKCQTASGCGEWKRPMKRNPAFKGIWNPPLVDNPNYKGIWKPRDIPNPNYFELDK
PYFDPIAAIGIEIWTMQEGILFDNILIAKDENVAESYRDTTWKPKFVVEKEKQKAEEEAA
GSDDLGGFQKTVFDVLYKFADIPFLSKYKLQILDFIEKAEKQPNLTIGVLVSIVVVILTA
IFMLIFSGKKQQPRVEKKTEVAADTSNDQGSSGEKPAEEEKEEEKENETGGAAPRQRRRD
T
NT seq 1626 nt   +upstreamnt  +downstreamnt
atgataatgatggggcattttgcgcttcttgtcttcttagcgttcgcgtcgatgcagctt
ctctgcattgccgctgatcatgatgctgcgattttttatgattcatttgaagagccattc
aatgggcgatggatcgtctctgataaagatgattataaaggtatatgggagcattcaaag
agtgaagggcacgatgactatgggcttctagtgaccgagaaggcacggaagtacgcaata
gtgaaagagctggaggagcctgtgaatctcagggatggaaccactgtgcttcagtacgag
gctcgcttccagaatggacttgaatgtggtggtgcatacctgaaataccttagacctcag
gaagctgggtggaagcctaaggaatttgacaatggatccccttactctatcatgtttgga
cctgacatatgtggattaacaaacaaggtgcactttatcctgaagcagaagaatcctaaa
tctggggaatatgttgaacatcatcttattgacccaccgcgcgtcccatctgacaagctt
tctcatgtctatactgccatcttgaagcctgacaatgagattagcattctgattgatgga
gaggtgaagaagaagggaaacttcctctcagctcaagattttgatcctccaattatccct
gccaagactattcctgacccaaatgagaagaaacccgaggactgggacgatagagtcaga
attcctgatcctaatgctgtgaagcctgatgattgggatgagaatgcacccatggaaatt
gaagatatggaggctgtgaaaccggaaggatggttagacgatgagtctgaagagatagat
gatcctgaggcaaccaagccagaagattgggatgatgaagaggatggtgtatgggaagcc
cccaaaattgataacccaaagtgtcagacagcttctggttgtggtgaatggaagagaccg
atgaagaggaacccagcttttaaaggaatatggaatcctcctctagtcgacaaccccaat
tacaagggtatttggaagcctagggacatcccaaaccctaactacttcgagcttgacaag
ccttactttgaccctatcgctgcaattggtatcgagatttggacaatgcaagaaggtata
ttgtttgacaatattttgatagccaaagacgagaatgttgctgagtcataccgggacacc
acatggaaaccaaagtttgtggttgagaaggaaaaacagaaggcggaggaagaagctgca
ggttcggatgatctcggtggcttccagaagacggtcttcgatgtcctatacaagtttgct
gatattcctttcttaagcaaatacaagctccaaattcttgacttcattgagaaggctgag
aaacaacccaacctcaccattggtgtcctggtctccattgtggtggttatcttgacagct
atcttcatgctcatttttagtgggaagaaacaacagccaagagtagagaagaaaacagag
gtggctgctgatacatcaaatgatcaaggaagcagtggagaaaagccagctgaagaggaa
aaggaggaggaaaaggagaatgaaactggtggtgctgctccccgccaaaggaggcgtgac
acttga

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