Gossypium hirsutum (upland cotton): 107912059
Help
Entry
107912059 CDS
T04793
Name
(RefSeq) calnexin homolog isoform X1
KO
K08054
calnexin
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04141
Protein processing in endoplasmic reticulum
ghi04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107912059
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107912059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ghi03110
]
107912059
04131 Membrane trafficking [BR:
ghi04131
]
107912059
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ghi04091
]
107912059
Chaperones and folding catalysts [BR:
ghi03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
107912059
Membrane trafficking [BR:
ghi04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
107912059
Autophagy
ER-phagy
Other ER-phagy associated proteins
107912059
Lectins [BR:
ghi04091
]
L-type lectins
107912059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
DUF1634
OATP
DUF4834
Motif
Other DBs
NCBI-GeneID:
107912059
NCBI-ProteinID:
XP_016695589
UniProt:
A0A1U8K4P8
LinkDB
All DBs
Position
D11:3482305..3485089
Genome browser
AA seq
541 aa
AA seq
DB search
MIMMGHFALLVFLAFASMQLLCIAADHDAAIFYDSFEEPFNGRWIVSDKDDYKGIWEHSK
SEGHDDYGLLVTEKARKYAIVKELEEPVNLRDGTTVLQYEARFQNGLECGGAYLKYLRPQ
EAGWKPKEFDNGSPYSIMFGPDICGLTNKVHFILKQKNPKSGEYVEHHLIDPPRVPSDKL
SHVYTAILKPDNEISILIDGEVKKKGNFLSAQDFDPPIIPAKTIPDPNEKKPEDWDDRVR
IPDPNAVKPDDWDENAPMEIEDMEAVKPEGWLDDESEEIDDPEATKPEDWDDEEDGVWEA
PKIDNPKCQTASGCGEWKRPMKRNPAFKGIWNPPLVDNPNYKGIWKPRDIPNPNYFELDK
PYFDPIAAIGIEIWTMQEGILFDNILIAKDENVAESYRDTTWKPKFVVEKEKQKAEEEAA
GSDDLGGFQKTVFDVLYKFADIPFLSKYKLQILDFIEKAEKQPNLTIGVLVSIVVVILTA
IFMLIFSGKKQQPRVEKKTEVAADTSNDQGSSGEKPAEEEKEEEKENETGGAAPRQRRRD
T
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgataatgatggggcattttgcgcttcttgtcttcttagcgttcgcgtcgatgcagctt
ctctgcattgccgctgatcatgatgctgcgattttttatgattcatttgaagagccattc
aatgggcgatggatcgtctctgataaagatgattataaaggtatatgggagcattcaaag
agtgaagggcacgatgactatgggcttctagtgaccgagaaggcacggaagtacgcaata
gtgaaagagctggaggagcctgtgaatctcagggatggaaccactgtgcttcagtacgag
gctcgcttccagaatggacttgaatgtggtggtgcatacctgaaataccttagacctcag
gaagctgggtggaagcctaaggaatttgacaatggatccccttactctatcatgtttgga
cctgacatatgtggattaacaaacaaggtgcactttatcctgaagcagaagaatcctaaa
tctggggaatatgttgaacatcatcttattgacccaccgcgcgtcccatctgacaagctt
tctcatgtctatactgccatcttgaagcctgacaatgagattagcattctgattgatgga
gaggtgaagaagaagggaaacttcctctcagctcaagattttgatcctccaattatccct
gccaagactattcctgacccaaatgagaagaaacccgaggactgggacgatagagtcaga
attcctgatcctaatgctgtgaagcctgatgattgggatgagaatgcacccatggaaatt
gaagatatggaggctgtgaaaccggaaggatggttagacgatgagtctgaagagatagat
gatcctgaggcaaccaagccagaagattgggatgatgaagaggatggtgtatgggaagcc
cccaaaattgataacccaaagtgtcagacagcttctggttgtggtgaatggaagagaccg
atgaagaggaacccagcttttaaaggaatatggaatcctcctctagtcgacaaccccaat
tacaagggtatttggaagcctagggacatcccaaaccctaactacttcgagcttgacaag
ccttactttgaccctatcgctgcaattggtatcgagatttggacaatgcaagaaggtata
ttgtttgacaatattttgatagccaaagacgagaatgttgctgagtcataccgggacacc
acatggaaaccaaagtttgtggttgagaaggaaaaacagaaggcggaggaagaagctgca
ggttcggatgatctcggtggcttccagaagacggtcttcgatgtcctatacaagtttgct
gatattcctttcttaagcaaatacaagctccaaattcttgacttcattgagaaggctgag
aaacaacccaacctcaccattggtgtcctggtctccattgtggtggttatcttgacagct
atcttcatgctcatttttagtgggaagaaacaacagccaagagtagagaagaaaacagag
gtggctgctgatacatcaaatgatcaaggaagcagtggagaaaagccagctgaagaggaa
aaggaggaggaaaaggagaatgaaactggtggtgctgctccccgccaaaggaggcgtgac
acttga
DBGET
integrated database retrieval system