Gossypium hirsutum (upland cotton): 107912227
Help
Entry
107912227 CDS
T04793
Name
(RefSeq) transcription factor MYC2-like
KO
K13422
transcription factor MYC2
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04016
MAPK signaling pathway - plant
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
107912227
04075 Plant hormone signal transduction
107912227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107912227
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
107912227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
RBR
bHLH_INO4
Spectrin_Anc-1_2
Striatin
CSN5_C
Motif
Other DBs
NCBI-GeneID:
107912227
NCBI-ProteinID:
XP_016695799
UniProt:
A0A1U8K594
LinkDB
All DBs
Position
D11:9522317..9524896
Genome browser
AA seq
496 aa
AA seq
DB search
MEVLIMSPSSCSSLVSFSQETPSSTLQQRLQFVIQSQQDLWAYAIFWQTLNDDLGNLFLA
WGDGHLQCTKDASPRLSSSFHSERTKVMKGIQALIGDHHDVDMSMIDGTDITDVEWLYMM
SMTRSFSAGEGIPGKALSTGSLVWLTGAHELQFYNCERAREAQMHGLETLVCIPTSCGVL
ELGSSEIIRENWGLVQQVKSLFESDLIGLVPKQSTPPNLTPASIQFLDRNISFADIGIIA
GVQEEDDASQDIKTKQEHSNNQTKKDSSKLGQPSYVDSEHSDSDFPLLAMNNVEKRTPKK
RGRKPGLGRETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYINDLK
AKIDELESQLQRERKKVKVEMVDTMDNQSTTTTTTSEEEQQATRPSYSSPGTGSGIELEV
KIMVNDAMIRVHSENVNYPAARLMGALRDLEFQVHHASMSSVNDLMLQDIVVRLPDGLRT
EEGLKSALLRRLDLQT
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcctcataatgtctccctcttcatgttcttctctggtttccttttcccaggaa
actccgtcttcaacccttcagcagaggctgcagtttgtaatccaaagccagcaagatttg
tgggcatatgctatattttggcagacactaaacgatgacctgggtaatctgttcttggct
tggggagatggtcatcttcaatgcactaaagatgcttctccaaggttgagttccagcttc
cacagcgaacgaactaaggtgatgaaaggaatccaagccctcattggagaccaccatgac
gtcgatatgtctatgatcgacggaaccgatatcactgatgtcgaatggctctatatgatg
tcaatgactcgatccttctctgctggcgaagggattcctggcaaggctcttagtactggg
tctttggtttggttaactggtgctcatgagttgcaattttacaattgtgaaagagctaga
gaagcccaaatgcatggacttgaaacactggtttgcatacccacttcttgtggcgttctt
gaactaggatcctccgagattatcagggaaaactggggtttagtccagcaagtgaaatcc
ctattcgaatccgatctcattggtctggttccaaaacaatcgactcctccaaatttaacc
ccagcttcgatccagtttcttgacagaaatatctcatttgcagacatcggcataatagcg
ggtgttcaggaagaagacgatgcaagccaggatattaaaacaaagcaagagcacagcaat
aaccaaaccaagaaagattcctcaaaacttgggcaaccttcttatgtggactcagagcat
tcagattctgattttccattactagccatgaataacgtggagaagcgaaccccaaagaaa
cgaggaaggaaacccggcctcggacgagagacaccgttgaaccatgtggaagcggagagg
caacgccgtgagaagctgaaccacagattctacgctctccgagcagtagtcccgaacgtg
tcgcgcatggacaaagcatcgctcttatctgacgctgtttcctacatcaatgatctaaag
gcgaaaattgatgaattagagtcgcagcttcagagagagcgtaagaaagtgaaggtagaa
atggttgatacaatggataaccaaagcaccactactactaccacatctgaggaagagcaa
caggcaaccaggcccagctattcatctcctggaactgggagtggcattgaactggaggtc
aagattatggtaaatgatgcaatgattagggttcactcagagaatgtgaactatccagca
gctaggctaatgggtgcccttcgtgacttggaattccaggtccatcatgcaagcatgtcg
tctgttaacgacctcatgcttcaggacattgtggtcaggcttcctgatgggttgagaact
gaagaaggcctcaaatctgctcttctcaggaggctagatctgcagacttga
DBGET
integrated database retrieval system