Gossypium hirsutum (upland cotton): 107912252
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Entry
107912252 CDS
T04793
Name
(RefSeq) pleiotropic drug resistance protein 3-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107912252
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
107912252
Transporters [BR:
ghi02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
107912252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC2_membrane_3
RsgA_GTPase
AAA_29
AAA_18
AAA_16
AAA
AAA_25
AAA_22
PduV-EutP
AAA_33
AAA_30
Rad17
AAA_28
TsaE
ABC_trans_N
NACHT
AAA_23
nSTAND3
NPHP3_N
AAA_15
AAA_5
Viral_helicase1
AAA_17
RuvB_N
AAA_7
ABC_ATPase
AAA_19
Motif
Other DBs
NCBI-GeneID:
107912252
NCBI-ProteinID:
XP_016695826
UniProt:
A0A1U8JZW4
LinkDB
All DBs
Position
D11:9969464..9979289
Genome browser
AA seq
1454 aa
AA seq
DB search
MGHHEVGNHDMEELGETERNLRSPFRHLSSSFRSTTSDLAVSSSLRENNDDEMELQWAAI
QRLPTFKRVRTSLFDFQLLNDTTKEEEDIKIEGKRKVIDVTKLGALERSVFIEKLITKIE
YDNLRLLEKLKERIGRVGLEFPTIDVRFQNLSVEADCEVVQGKPIPTLWNTITTVFSALT
KVSRCKSQSHKIKILKDISGIIKPSRMTLLLGHPGCGKTTLLQALSGKLNPSLKVTGEIS
YNGYKFTEFVPRNTSAYISQYDLHISEMTVRETLDFSARCQGIGDRADMLKEISRREKQS
GIVPEPDIDTYMKAISVEGLKGTLQTDYILKILGLDICADTIVGDAMNRGISGGQKRRLT
TGEMIIGPNKALFMDEISTGLDSSTTFQIVTCLQQLTHITEATLLVSLLQPAPEIFDLFD
DIILMAEGKIVYQGPRSSVQEFFEHCGFRCPERKGVADFLQELLSERDQAQYWYCKDQHH
SFVSVDNFIVAFKKFQAAQKLNEELCTPFNKRESHKSALSFNMYSMGKWELLKTCMAREW
LLMKRNSFVHIFKSSQLVVIALITMTIFIRTRMKLDLVHASYYQGSLFYALIRLMTTGIT
ELALTVSRLSVFYKQRDFYFYPAWAYSIPAAILKIPFSLMDAFLWTALTYYVIGYSPEPE
RFFRLLFLLFLVHQMAISLFRLIASVVRDPPFAANFSLFTLLVIFLFSGFIIPRPFLPAW
VKWGFWLSPLAYSEIGVAVNEFLAPRWQQVSSSNATLGQQVLEKRGLNFSDYYYWISVGA
LIGFWMIFNIGFTFALSLLKPPGSSRAIISHERFSYLKAKEDLSDTALQKELPSVDSLTE
RKVKEMVLPFKPITISFKDVQYFVDTPKKLREQGYPQRLQLLQDITGAFRPGVLTALMGV
SGAGKTTLMDVLSGRKTGGYIEGDIRIGGYPKVQETYARISAYCEQTDIHSPMITVEESV
MYSAWLRLPTEINKHQRLEFVAEVLQMIELDEIKDALVGIPHVSGISPEQRKRLTIAVEL
VSNPSIIFMDEPTSGLDARAAAIVMRVVKNIVNTKRTIVCTIHQPSIDIFESFDELILMK
RGGQMIYSGELGQHSSRLIEYFEGIPGVPKIKENHNPATWMLEVTSPSVEAQLGIDFACI
YKESHLYKRNKEIVKSQSLPTQGSEKLQFSTPFPQNGWEQLKACLWKQHLSYWRSPKYNL
VRLAFIILSSLLYGVLLRQKGQNLHDEQDFFNIMGSMYVFMIFTGISSCSSVLPFVSTQR
TIVYRERFSRMYSSWAYSLAQVIIEIPYIFLEAVLFLTITYPAVNFYGSAYKVFWYFYTV
FCTLLYYKYLGMMLVSLTPTFQVATIFASLCYTLFSLFSGYLIPGPQFPKWWVWGYWISP
SSWSLKGLLTSQYGEIEEEIMAFGEKKALNTFLDSQYGYKHRDLPIIAVVLLAFPLVFAS
VFTYGIAKLNYQRR
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atggggcatcatgaagtagggaaccatgacatggaagagctgggtgagacagagagaaac
ctgaggtcaccttttcgccacttatcgtcaagcttcaggagcactacctcggacctcgcg
gtgtcgtcgtcgttgagagaaaataatgatgacgagatggagttgcagtgggctgcgatt
cagagactgcccacttttaagcgcgtaagaacctcattgttcgatttccagcttttaaat
gacactaccaaagaagaagaggatatcaaaattgaggggaagaggaaggtgatcgatgtt
accaagctgggagcattggagcgcagcgtttttatcgagaaactcattaccaaaattgag
tacgataatcttcgcctcttggagaaactgaaagaacgaataggcagagtggggttggaa
tttccaactattgatgtgagattccagaatttgtcagtggaagcagattgtgaagtagtt
caagggaagcccattcctacactttggaacaccatcaccactgtattctctgctttgaca
aaagttagcagatgcaagtctcaatcacacaagataaaaattctcaaagatatcagtggc
atcatcaagccctcaaggatgactctattgcttggccatccaggctgcggaaagaccacc
ttgttacaagcactttcagggaagcttaatccatctctcaaggtcacaggggaaatatcc
tacaatggttacaagttcacagagtttgtgcctcggaatacatcagcttacataagtcaa
tatgacctacacatttctgaaatgactgtaagagaaacacttgacttctcagctcgttgc
cagggcattggagacagagcagatatgttaaaagaaatcagtagaagggagaagcaatct
ggcattgttccggaaccagatatagacacatacatgaaggcaatttctgttgaaggatta
aaaggaactctccagacagattatatattgaagattcttggactggacatttgtgccgat
actatagtgggagatgcaatgaacagaggtatctcaggaggtcaaaagagaaggctgaca
acaggggaaatgatcatcggtccaaataaagcactctttatggatgaaatatcaactggc
ttagacagctccactaccttccaaatagttacctgtttacagcaactaacccacattaca
gaggcaacacttctagtatcacttcttcaaccggcaccagagatctttgatctctttgac
gacattattctgatggcagaaggaaagattgtataccaaggaccacgcagttctgttcaa
gagttctttgaacattgtggttttaggtgccctgagcgcaaaggcgttgctgacttcctc
caagaactgctttctgaaagggaccaagcacaatactggtattgtaaagaccaacatcat
agttttgtttctgtggacaactttatagttgcattcaagaagtttcaagcagcccagaag
ctaaatgaagaactgtgcacacctttcaacaaacgtgagagtcataaaagtgccttgtca
ttcaacatgtattcaatgggaaaatgggaattactcaaaacatgcatggcaagagaatgg
cttctcatgaagagaaactcatttgttcatatctttaaatcgtcacagcttgtagttatt
gcactcataacgatgaccatctttattcgcactcggatgaagcttgaccttgtccatgca
agctattaccagggttccctgttttatgctctcataaggcttatgacgaccggaattact
gagttggcattaactgtttccagactttctgtgttctataagcaaagagatttctacttc
tacccagcatgggcatattccattccggctgctattctaaagattccattttcattgatg
gatgcttttctgtggacagctcttacatactatgtgattggttacagtcctgaaccagaa
aggttcttccgcctgctcttcctccttttccttgttcatcaaatggcaatttcactattc
cgtttaattgcttcagttgtcagagacccaccttttgcagcaaattttagtctttttaca
ttattggtgatatttttattcagtggcttcataattccacggcctttcctacctgcttgg
gtcaaatggggcttttggctttccccacttgcatattctgaaataggtgttgcagtgaat
gaatttctagcaccaaggtggcaacaggtttcatcttcaaatgccaccttaggacagcaa
gttctagaaaaacgtgggttaaacttcagtgactactactattggatatcagtaggagca
ttgatagggttctggatgatttttaacattggtttcacctttgctttgagccttttaaag
cctccagggagttctcgggctattatttctcatgaaagattttcttacctaaaggcaaaa
gaggatttgagtgacacagctctgcaaaaagaattgcccagtgttgactctctaacagaa
agaaaagttaaggaaatggttttaccttttaagcccataacgatatcattcaaggatgtg
caatactttgttgatactccgaagaaactgagagagcaggggtatccacaaagactacag
ctacttcaagatattaccggtgcatttagacctggagttctcacagctttgatgggtgtt
agtggagcagggaaaacaacactaatggatgtactatcaggaagaaaaacaggtggttat
attgaaggagacataagaattggagggtaccccaaagtccaagaaacatatgctagaata
tcagcttactgtgagcaaactgacatccattctccaatgattacagtagaggaatcagtg
atgtactcagcttggttgcgtctaccaactgagattaataagcatcaaagattggaattt
gtagcagaggttcttcaaatgattgagttggatgaaatcaaagatgctttagttggcatc
ccgcatgtaagtggaatatcaccagagcagcgtaaacggttaaccattgcagtagaactt
gtttctaatccatccataatatttatggatgagccaacttcaggtttagatgccagagca
gctgcaattgtcatgcgagttgtgaagaatattgttaacacaaagaggacaattgtatgc
accatccatcagccaagtatcgacatatttgaatcatttgatgagcttattttgatgaaa
agagggggacaaatgatatattctggagaactgggtcagcattcaagtaggcttatcgaa
tactttgagggtatacctggagtaccaaaaattaaagaaaatcataacccagcgacatgg
atgttagaagtcaccagtccttctgtggaagctcaacttggaatagactttgcctgtatc
tacaaagaatcccatctctacaagagaaacaaagaaattgttaaaagccaaagccttcca
acacagggttcagagaaactacaattttctacaccctttccacaaaatggatgggagcaa
cttaaagcatgcctttggaaacagcacttgtcctattggagaagtcccaaatacaactta
gtacggttggcgtttattattttatcttctttgttgtatggagtcttacttcggcagaaa
ggacaaaacctacatgatgagcaggattttttcaacataatgggatcgatgtatgttttc
atgattttcactggaataagcagttgttcatctgttcttccattcgtgtctactcagagg
acaatagtctaccgtgaaagattttccagaatgtactcttcatgggcatattcgttggca
caggtgattattgagattccttatatctttcttgaagcagtattattcctgacaatcact
tatccagctgtaaacttctatggatccgcttacaaagtattttggtacttttacaccgta
ttttgtacgctgctctattacaaatatttaggcatgatgttggtttctttgactccaact
ttccaagtagctacaatatttgcaagcctctgttacacgttgttcagcttgttctcaggg
tacctcataccaggaccgcaatttcctaaatggtgggtttggggctactggatttcccca
agttcgtggtccctgaaaggtctcctcacttcacaatatggagagatagaggaagaaatc
atggcatttggagagaaaaaagcactcaacaccttcttggacagtcagtatgggtataaa
catcgagatctacccataatagccgttgtactacttgcttttccgcttgtctttgcatct
gtttttacatatggtatagctaaactaaattatcaaaggagataa
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integrated database retrieval system
