Gossypium hirsutum (upland cotton): 107912255
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Entry
107912255 CDS
T04793
Name
(RefSeq) pleiotropic drug resistance protein 3-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107912255
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
107912255
Transporters [BR:
ghi02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
107912255
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
RsgA_GTPase
AAA_29
AAA_18
AAA
ABC_trans_N
AAA_22
Rad17
AAA_16
AAA_28
AAA_30
AAA_25
TsaE
ABC2_membrane_3
AAA_33
PduV-EutP
AAA_17
NACHT
AAA_5
AAA_23
AAA_14
ORC-CDC6-like
RuvB_N
RNA_helicase
Viral_helicase1
AAA_11
nSTAND3
NPHP3_N
AAA_19
ABC_ATPase
AAA_7
Spore_III_AA
T2SSE
Motif
Other DBs
NCBI-GeneID:
107912255
NCBI-ProteinID:
XP_016695828
UniProt:
A0A1U8K4C6
LinkDB
All DBs
Position
D11:9953190..9962181
Genome browser
AA seq
1457 aa
AA seq
DB search
MGHELGKHGMMEELAETGRNLGSSFRHLSSSFRSTTSDLAVSSFRQNNDDEMELQWAAIQ
RLPSFKRLRTSLFDHKLLNETTKEEEEIKVDRKRKVIDVTELGALERRVFIEKLITKIED
DNLRLLKKLKERIDRVGLEFPTIEVRFQNLSVEADCEVVQGKPIPTLWNTITSVFSALTT
VRRCKSQSYKIKVLKDISGIIKPSRMTLLLGPPGCGKTTLLRALSGKLNPSLKVTGEISY
NGYKFTEFVPQNTSAYISQYDLHISEMTVRETLDFSARCQGIGGRADMLKEISRREKQSG
IVPEPDIDTYMKAISIEGLKGTLQTDYILKILGLDICADTIVGDAMNRGISGGEKRRLTT
GEMIIGPNKALFMDEISTGLDSSTTFQIVTCLQQLTHITEATILVSLLQPPPETFDLFDD
IILMAEGKIVYQGPRNYVQEFFEHCGFRCPERKGVADFLQEVLSEKDQAQYWYRKDQPYS
FVSVDNFIVAFNKFHTVQKLNEELCTPFHKCESHKSALSFNIYSLGKWELLKTCMAREWL
LIKRNSFVYVSKTLQLVVIALITMTIFIRTRMKLDLVHASYYLGSLFYALIRLMTTGVAE
LALTVSRLSVFYKQRDCYLYPAWAYSIPAAILKIPFSFIDAFLWTALTYYVIGYSPEPER
FFRQLFLLFLIHQMAISLFRFIASVIRDPPFAANFGLFTIMVIFLFSGFIIPQPLLPSWL
KWGFWLSPLACSEIGIAVNEFLAPRWQQVSSSSATLGQQVLEKRGLNFSGYYYWISVAAL
IGFWIIFNIGFTFALSLLKPPGSSRAIISHERFSYLKAKEDLSDTTEEKELPNADSLKAP
AETKVKGMVLPFKPISISFEDVQYFVDTPKKLREQVCPQKRLQLLQDITGAFRPGILTAL
MGVSGAGKTTLMDVLSGRKTGGYIEGEIRIGGYPKVQETYARISAYCEQTDIHSPMITVE
ESVMYSAWLRLPTEINKHQRLEFVAEVLQMIELDEIKDALVGIPHASGISPEQRKRLTIA
VELVSNPSIIFMDEPTSGLDARAAAIVMRVVKNIVYTKRTIVCTIHQPSIDIFEAFDELI
LMKRGGQMVYSGELGQHSSRLIEYFEGIPGVPKIKENHNPATWMLEVTSTSVEAQLGIDF
ALIYKESHLYKRNKEIVKSQSLPAQGSEKLQFSTPFPQNGWEQLKACLWKQHLSYWRTPK
YNLARLAFTISSSSFYGALLWQKGQNLHDEQDFFNIIGSTYVFIIFTGTSNCSSVLPFIS
TQRTIVYRERFARMYSSWAYSVAQVIIEIPYIFLEAVLFLTITYPAVNFYGSAYKVFWYF
YTVFCTLLYYKYLGMMLVSLTPTYQVATIYASLFYTLLSLFSGYLMPGPKFPKWWVWGYW
ISPSSWSLKSLLTSQYGDIKEEIVVFGEKKALNSFLDSQYGYKYQDLPIIAIVLLAFPLV
FASVFAYGIAKLNYQRR
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atggggcatgaactagggaagcatggcatgatggaagagctggctgagacagggagaaac
ctcgggtcatcttttcgccacttatcttcaagcttcaggagtactacctcggacctcgct
gtgtcctccttcagacaaaataatgacgacgagatggagttgcagtgggctgcaattcag
agactgcccagttttaagcgcttaagaacctcgttgtttgatcacaagcttttaaatgaa
actaccaaagaagaagaggaaatcaaagttgacaggaagaggaaagtgatcgatgttaca
gagcttggagcattggaacgccgcgttttcatcgagaaactcattaccaaaattgaggac
gataatctccgactgttaaagaaactgaaagaaagaatagacagagtggggctggaattt
ccaactattgaggtgagattccagaatttgtcagtggaagcagattgtgaagtagttcaa
ggaaagcccattcccacactttggaacaccatcaccagtgtattctctgctttaacaaca
gttagaagatgcaagtctcaatcgtacaagataaaagttctcaaagatatcagtggcatc
atcaagccctcaaggatgactctattgcttggccctccgggctgcggaaagaccactttg
ttacgggcgctttcagggaagcttaatccatctctcaaggtcacaggggaaatatcctac
aatggttacaagttcacagagtttgtgcctcagaatacatcagcttacataagtcaatat
gacctacacatttctgaaatgactgtaagagaaacacttgacttctcagctcgttgccag
ggcattggaggccgagcagatatgttaaaagaaattagtagaagggagaagcaatctggc
attgtcccggaaccagatatagacacatacatgaaggcaatctctattgaaggactaaaa
ggaactctccagacagactatatattgaagattcttggactggacatttgtgctgatact
atagtgggagatgcaatgaacagaggaatctcaggtggtgaaaagagaaggctgacaaca
ggggaaatgataattggtccaaataaagctctctttatggatgaaatatcaactggctta
gacagctccactaccttccaaatagttacctgtctacagcaactaacccacataacagag
gcaacaattctagtatcgcttcttcaaccaccaccagagacttttgatctctttgacgat
attattctaatggcagaaggaaagattgtataccagggaccacgcaattatgttcaagag
ttctttgaacattgcggttttaggtgccctgaacgcaaaggggttgctgacttcctccaa
gaagtgctttctgaaaaggaccaagcacagtactggtatcgtaaagaccaaccttatagt
tttgtttctgtggacaacttcatagttgcattcaataagtttcacacagtccagaagcta
aatgaagaactgtgcacacctttccataaatgtgagagtcataaaagtgccttgtcattc
aacatatattcattgggaaaatgggaattactcaaaacatgtatggcaagagagtggctt
ctcattaagagaaactcatttgtttatgtctctaaaacattacagcttgtagttattgca
ctgataacgatgaccatctttattcgcactcggatgaagcttgaccttgtccatgcaagc
tattacctgggttccctgttttatgctctcataagacttatgacgaccggagttgctgag
ttggcattaactgtttcccgactttcagtattctataagcaaagagattgctacttatac
ccagcatgggcttattccattccagctgctattctaaagattccattttcatttatagat
gcttttttgtggacagctctaacatactatgtgattggttacagtcctgaaccggaaagg
ttcttccgccagctcttcctccttttccttattcatcaaatggcaatatcactattccgt
ttcattgcttcagttattagagatccaccttttgcagcaaattttggtctttttacaata
atggtgatatttttattcagtggcttcataattccacaacctttactaccttcttggctc
aaatggggcttttggctttcaccacttgcatgttctgaaataggtatcgcagtaaatgaa
tttctagcaccgaggtggcaacaggtttcatcttcaagtgccaccttaggacagcaagtt
ctagaaaaacgtgggttaaacttcagtggctactactactggatatcagtagcagcattg
ataggattttggattatttttaacattggattcaccttcgctttgagccttttaaagcct
ccagggagttctcgggctattatttctcatgaaagattttcttacctaaaggcaaaagag
gatttgagtgatacaactgaggaaaaagaattgcctaatgccgactctctaaaagctcca
gctgaaacaaaagttaagggtatggttttaccttttaagcccatatcgatatcgttcgag
gatgtgcaatactttgttgatactcctaagaaactgagagagcaagtgtgtcctcaaaaa
agactacagctacttcaagatattaccggtgcatttagaccaggaattctcacagctttg
atgggtgttagtggagctgggaaaacaacactaatggatgtcctttcaggaagaaaaact
ggcggttatattgaaggagagataagaattggagggtaccccaaagtccaagaaacatat
gctagaatatcagcttactgtgagcaaactgacatccattctccaatgattacagtagag
gaatcagtgatgtactcagcttggttgcgtctaccaactgagattaataagcatcaaaga
ttggaatttgtagcagaggttcttcaaatgattgagttggatgaaatcaaagacgcttta
gttggcatcccccatgcaagtggaatatcaccagagcagcgtaaacggctaaccatagca
gtagaacttgtttctaatccatccataatatttatggatgagcctacttcgggtttagat
gccagagcagctgcaattgtcatgcgagttgtgaagaatattgtttacacaaagaggaca
attgtatgcaccatccatcagccaagtattgacatattcgaagcatttgatgagcttatt
ttgatgaaaagaggaggacaaatggtatattccggagaactgggtcagcattctagtagg
cttatcgaatactttgagggtatacctggagtaccaaaaattaaagaaaaccataaccca
gcaacatggatgttagaagtcactagtacttctgtggaggctcaacttggaatagacttt
gcccttatctacaaagaatcccatctctacaagagaaacaaagaaatagttaaaagccaa
agccttccagcacagggttcggagaaactacagttttctacaccctttccgcaaaatgga
tgggagcaattaaaagcatgcctttggaaacaacacttgtcctattggagaactcccaaa
tacaacttggcacgcttggcttttactatttcatcttcttcgttttatggagccttactc
tggcagaaaggacagaacctacatgatgagcaggattttttcaacataatcggatcaaca
tatgttttcatcatattcactggaacaagcaattgttcatctgttcttccattcatatct
actcagcgtacaatagtctaccgtgaaaggtttgccagaatgtactcttcatgggcatat
tcagttgcacaggtgattattgagattccttatatctttcttgaagcagtattattcctg
acaatcacttatccagctgtaaacttctatggatccgcttacaaagtattttggtacttc
tacaccgtattttgtacgctgctctattacaaatatttaggcatgatgttggtttctttg
actccaacttaccaagtagctacaatatatgcaagcctcttttacactttgttaagcttg
ttctcggggtacctcatgccaggaccgaaatttcctaaatggtgggtttggggatactgg
atttccccaagttcgtggtccctgaaaagtctcctcacttcacaatatggagatataaag
gaagaaattgtagtatttggagagaaaaaagcactcaactccttcttggacagtcagtat
ggctataaatatcaagatttacccataatagccattgtacttcttgcttttccacttgtc
tttgcatctgtttttgcatatggtatagctaaactaaactatcaaaggagataa
DBGET
integrated database retrieval system
