Gossypium hirsutum (upland cotton): 107912394
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Entry
107912394 CDS
T04793
Name
(RefSeq) RNA-binding protein BRN1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107912394
Spliceosome [BR:
ghi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107912394
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
RNA_bind
GHMP_kinases_C
Motif
Other DBs
NCBI-GeneID:
107912394
NCBI-ProteinID:
XP_040961978
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All DBs
Position
D11:11839891..11845819
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AA seq
436 aa
AA seq
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MAEGKQEKNTTSEESVKLFVGQVPKHMTEAQVLAIFEEFALVDEVNIIKDKATLSSRGCC
FVICPSREEADKAVDACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVKEDEV
ADLFSKYGTIKDLQIIRGSQQTSKGCAFLKYETKEQALDALQAVNGKHRMEGSSVPLVVK
WADTEKERLARRAQKAQFQALNKPNVDSQHPSLFGALPMGYVPPYNGYGYQAPGSYGLMQ
YRMPPMQNQSAFHSMIPPVNQASALRGITPDLAPRAGPRNYAMPPGSYVGSAYPAVQGVQ
YPMAYPGGIISHHPLTSSPGSLPQANTSSNSSSASSVGTSSGSQIEGPPGANLFIYHIPQ
EFGDQELTNAFQGYGRVLSAKVFVDKATGASKCFGFVSYDSPAAAQNAINMMNGCQLGGK
KLKVQLKRDNKQNKPY
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggaaaacaggagaagaacacgacaagcgaagagagcgttaagctgttcgtc
ggtcaagtgccgaagcacatgacagaagctcaagttcttgcaatcttcgaagagttcgct
ttggtcgacgaagtcaacatcatcaaagacaaggctactctttcctctagaggttgttgc
tttgttatatgcccgtcgagagaagaggccgataaggcggtcgatgcctgtcacaataag
aagactttgcctggggcatctagtccattgcaagtgaagtatgcagatggcgagttggaa
agattagagcacaaactttttgttggcatgctgccgaagaatgtcaaagaagatgaagtt
gctgatttattttctaaatatggaaccataaaggacctacaaattataagaggttctcaa
caaacaagtaaaggctgtgcctttctgaaatatgagactaaagaacaagcccttgacgcg
ctgcaggctgttaatggaaagcatagaatggagggttcaagtgtccctctcgttgtcaaa
tgggcagatacagagaaggaaagactagcacgaagggctcaaaaagcccaatttcaagct
ttgaataaaccgaatgtagattcacaacatccttcattgtttggagcattgccaatgggt
tatgttcccccatacaatggatatggatatcaggctccaggaagttatggacttatgcag
taccgcatgccacccatgcagaatcagtctgcatttcacagcatgattcctccagtaaat
caagcaagtgcattgcgaggaatcacacctgaccttgctcccagggctggacctagaaat
tatgctatgcctcctggaagttatgttggctccgcttacccagctgtgcaaggtgttcag
taccccatggcatatcctgggggaattattagccaccatccgttgaccagttcacctggt
tcactaccacaagcaaatacaagcagtaactcttcatcagcttccagtgtcggtacaagc
tcgggaagtcagattgaaggtccacctggtgcaaacctatttatttatcacatacctcaa
gaatttggagaccaagaattgacaaacgcttttcaaggatatggtagggttttaagtgca
aaggtttttgttgacaaagcaacgggggctagcaaatgttttggatttgtaagttacgac
tctccggcagctgctcaaaatgccataaacatgatgaatggatgccaattaggaggtaag
aaactgaaggttcagcttaagagagacaacaaacagaacaaaccttattaa
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